Gene family  

Sub-families
ORTHO010257 (19 genes in 13 species)
ORTHO012912 (14 genes in 11 species)
ORTHO025699 (4 genes in 3 species)
View all sub-families (5)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (7 genes)
ath
Arabidopsis thaliana (5 genes)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (10 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (7 genes)
mtr
Medicago truncatula (5 genes)
ptr
Populus trichocarpa (5 genes)
rco
Ricinus communis (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (3 genes)



The gene family HOM002084 has 60 genes in 13 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 3, showing 20 records out of 60 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G07950 aly name=fgenesh2_kg.371__1__AT2G45900.1;pid=497410;prot=eq;tid=497410 + scaffold_371 No
AL1G00600 aly name=Al_scaffold_0001_57;pid=878290;prot=eq;tid=909803 - scaffold_1 No
AL1G40600 aly name=scaffold_104312.1;pid=891518;prot=eq;tid=923031 - scaffold_1 Yes
AL1G40610 aly name=scaffold_104313.1;pid=891519;prot=eq;tid=923032 - scaffold_1 No
AL4G33880 aly name=fgenesh2_kg.4__2790__AT2G45900.1;pid=483730;prot=eq;tid=483730 - scaffold_4 No
AL5G32060 aly name=fgenesh2_kg.5__2604__AT3G61380.1;pid=486612;prot=eq;tid=486612 - scaffold_5 No
AL6G41190 aly name=fgenesh2_kg.6__3659__AT4G00440.1;pid=490525;prot=eq;tid=490525 - scaffold_6 No
AT1G01690 ath Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.;putative recombination initiation defects 3 transcript=eq;prot=eq; + 1 No
AT1G01695 ath Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G00440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related transcript=eq;prot=eq; + 1 No
AT2G45900 ath Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).;Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related transcript=eq;prot=eq; - 2 No
AT3G61380 ath Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 970 Blast hits to 833 proteins in 189 species: Archae - 0; Bacteria - 72; Metazoa - 269; Fungi - 106; Plants - 168; Viruses - 2; Other Eukaryotes - 353 (source: NCBI BLink).;Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related transcript=eq;prot=eq; - 3 No
AT4G00440 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1283 Blast hits to 1059 proteins in 155 species: Archae - 0; Bacteria - 77; Metazoa - 265; Fungi - 74; Plants - 239; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).;Protein of unknown function (DUF3741) transcript=eq;prot=eq; + 4 No
CP00011G00040 cpa name=evm.TU.supercontig_11.4;pid=evm.TU.supercontig_11.4;prot=eq;transcript=eq - supercontig_11 No
CP00011G00050 cpa name=evm.TU.supercontig_11.5;pid=evm.TU.supercontig_11.5;prot=eq;transcript=eq - supercontig_11 No
CP00011G00060 cpa name=evm.TU.supercontig_11.6;pid=evm.TU.supercontig_11.6;prot=eq;transcript=eq - supercontig_11 No
CP00074G00580 cpa name=evm.TU.supercontig_74.58;pid=evm.TU.supercontig_74.58;prot=eq;transcript=eq - supercontig_74 No
FV5G02960 fve Protein MSB2 (probable) transcript=eq;prot=eq;pid=gene32499 - LG5 No
FV7G08040 fve Cytochrome P450 716B2 (probable) transcript=eq;prot=eq;pid=gene19313 + LG7 No
FV7G08050 fve Glutamic acid-rich protein precursor (probable) transcript=eq;prot=eq;pid=gene19314 + LG7 No
GM03G01120 gma 03 pid=16250736;transcript=eq;prot=eq;name=Glyma03g01120.1 + Gm03 No
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