Gene family 
- Id
- HOM002079
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
- No subfamilies present
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (2 genes)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (2 genes)
- fve
- Fragaria vesca (3 genes)
- gma
- Glycine max (6 genes)
- lja
- Lotus japonicus (4 genes)
- mdo
- Malus domestica (8 genes)
- mes
- Manihot esculenta (4 genes)
- mrcc299
- Micromonas sp. RCC299 (2 genes)
- mtr
- Medicago truncatula (3 genes)
- olu
- Ostreococcus lucimarinus (2 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ota
- Ostreococcus tauri (2 genes)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (3 genes)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (2 genes)
- vvi
- Vitis vinifera (2 genes)
- zma
- Zea mays (3 genes)
The gene family HOM002079 has 60 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM002079
Page 1 of 3, showing 20 records out of 60 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL4G34210 | aly | name=fgenesh2_kg.4__2828__AT2G46210.1;pid=483768;prot=eq;tid=483768 | + | scaffold_4 | No | |
| AL5G32320 | aly | name=scaffold_503403.1;pid=907699;prot=eq;tid=939212 | + | scaffold_5 | No | |
| AT2G46210 | ath | Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink).;Fatty acid/sphingolipid desaturase | transcript=eq;prot=eq; | + | 2 | No |
| AT3G61580 | ath | Fatty acid/sphingolipid desaturase; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT2G46210.1); Has 5416 Blast hits to 5306 proteins in 857 species: Archae - 2; Bacteria - 1062; Metazoa - 955; Fungi - 1609; Plants - 915; Viruses - 2; Other Eukaryotes - 871 (source: NCBI BLink).;Fatty acid/sphingolipid desaturase | transcript=eq;prot=eq; | + | 3 | No |
| BD4G28320 | bdi | NADPH-hemoprotein reductase activity, L-lactate dehydrogenase (cytochrome) activity, cytochrome-b5 reductase activity (Blast2GO) | pid=Bradi4g28320.1;tid=Bradi4g28320.1;GeneName=Bradi4g28320;transcript=eq;prot=eq | + | Bd4 | No |
| CP00007G01760 | cpa | name=evm.TU.supercontig_7.176;pid=evm.TU.supercontig_7.176;prot=eq;transcript=eq | + | supercontig_7 | No | |
| CP00011G00520 | cpa | name=evm.TU.supercontig_11.52;pid=evm.TU.supercontig_11.52;prot=eq;transcript=eq | - | supercontig_11 | No | |
| FV2G32870 | fve | Fatty acid desaturase 2 (Delta(6) desaturase) (probable) | transcript=eq;prot=eq;pid=gene02698 | - | LG2 | No |
| FV7G06710 | fve | Fatty acid desaturase 3 (probable) | transcript=eq;prot=eq;pid=gene18998 | + | LG7 | No |
| FV7G06740 | fve | Fatty acid desaturase 1 (Delta(5) desaturase) (probable) | transcript=eq;prot=eq;pid=gene19001 | + | LG7 | No |
| GM01G05470 | gma | 01 | pid=16243502;transcript=eq;prot=eq;name=Glyma01g05470.1 | + | Gm01 | No |
| GM02G11820 | gma | 02 | pid=16247774;transcript=eq;prot=eq;name=Glyma02g11820.1 | + | Gm02 | No |
| GM08G41120 | gma | 08 | pid=16273432;transcript=eq;prot=eq;name=Glyma08g41120.1 | + | Gm08 | No |
| GM14G10890 | gma | 14 | pid=16295115;transcript=eq;prot=eq;name=Glyma14g10890.1 | - | Gm14 | No |
| GM17G34640 | gma | 17 | pid=16307048;transcript=eq;prot=eq;name=Glyma17g34640.1 | + | Gm17 | No |
| GM18G15260 | gma | 18 | pid=16308876;transcript=eq;prot=eq;name=Glyma18g15260.1 | - | Gm18 | No |
| LJ0G283410 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_096491;name=LjSGA_096491.1.1 | - | LjSGA_096491 | No | |
| LJ0G422650 | lja | partial;prot=eq;transcript=eq;scaffold=LjT46I09;name=LjT46I09.200.nd | - | chr0 | No | |
| LJ0G467910 | lja | prot=eq;transcript=eq;scaffold=LjT10I07;name=LjT10I07.190.nd | - | chr0 | No | |
| LJ5G004420 | lja | prot=eq;transcript=eq;scaffold=CM0019;name=chr5.CM0019.90.nd | + | chr5 | No |