Gene family  

Sub-families
ORTHO004954 (26 genes in 25 species)
ORTHO005988 (25 genes in 24 species)
ORTHO031197 (3 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (3 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family HOM002051 has 61 genes in 25 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 61 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G06370 aly name=scaffold_23400002.1;pid=920378;prot=eq;tid=951891 + scaffold_234 No
AL0G06380 aly name=scaffold_23400003.1;pid=920379;prot=eq;tid=951892 + scaffold_234 No
AL3G00450 aly name=fgenesh1_pg.C_scaffold_3000042;pid=340279;prot=eq;tid=340279 - scaffold_3 No
AL5G18820 aly name=Al_scaffold_0005_1791;pid=866312;prot=eq;tid=897825 + scaffold_5 No
AL7G12130 aly name=fgenesh2_kg.7__1234__AT4G29590.1;pid=491801;prot=eq;tid=491801 + scaffold_7 No
AL7G34920 aly name=scaffold_703666.1;pid=915924;prot=eq;tid=947437 + scaffold_7 No
AT3G01660 ath S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G29590.1); Has 1347 Blast hits to 1347 proteins in 403 species: Archae - 26; Bacteria - 759; Metazoa - 25; Fungi - 12; Plants - 94; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink).;S-adenosyl-L-methionine-dependent methyltransferases superfamily protein transcript=eq;prot=eq; + 3 No
AT4G29590 ath S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G01660.1); Has 1031 Blast hits to 1031 proteins in 322 species: Archae - 24; Bacteria - 646; Metazoa - 0; Fungi - 12; Plants - 95; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).;S-adenosyl-L-methionine-dependent methyltransferases superfamily protein transcript=eq;prot=eq; - 4 No
BD2G48030 bdi pid=Bradi2g48030.1;tid=Bradi2g48030.1;GeneName=Bradi2g48030;transcript=eq;prot=eq - Bd2 No
BD5G13580 bdi pid=Bradi5g13580.1;tid=Bradi5g13580.1;GeneName=Bradi5g13580;transcript=eq;prot=eq + Bd5 No
CP00130G00630 cpa name=evm.TU.supercontig_130.63;pid=evm.TU.supercontig_130.63;prot=eq;transcript=eq - supercontig_130 No
CP00885G00010 cpa name=evm.TU.supercontig_885.1;pid=evm.TU.supercontig_885.1;prot=eq;transcript=eq + supercontig_885 No
CR01G14920 cre name=Chlre2_kg.scaffold_42000023;pid=151943;prot=eq;tid=151943;transcript=eq - chromosome_1 No
CR12G13260 cre name=estExt_fgenesh2_pg.C_200137;pid=190827;prot=eq;tid=190827;transcript=eq + chromosome_12 No
CR13G07840 cre name=estExt_fgenesh2_kg.C_380010;pid=185063;prot=eq;tid=185063;transcript=eq + chromosome_13 No
FV0G36900 fve Menaquinone biosynthesis methyltransferase ubiE (probable) transcript=eq;prot=eq;pid=gene11426 - scf0513146 No
FV0G40250 fve Methyltransferase-like protein 7B, Precursor (probable) transcript=eq;prot=eq;pid=gene27979 + scf0513124 No
FV2G05610 fve Menaquinone biosynthesis methyltransferase ubiE (probable) transcript=eq;prot=eq;pid=gene25575 + LG2 No
GM01G00590 gma 01 pid=16242925;transcript=eq;prot=eq;name=Glyma01g00590.1 + Gm01 No
GM07G15500 gma 07 pid=16267379;transcript=eq;prot=eq;name=Glyma07g15500.1 - Gm07 No
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