Gene family  

Sub-families
ORTHO000778 (47 genes in 25 species)
ORTHO033841 (3 genes in 2 species)
ORTHO037381 (3 genes in 3 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (4 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM001941 has 64 genes in 25 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 64 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G38360 aly name=fgenesh1_pg.C_scaffold_1003268;pid=336703;prot=eq;tid=336703 - scaffold_1 No
AL4G14260 aly name=fgenesh2_kg.4__946__AT2G29700.1;pid=481886;prot=eq;tid=481886 + scaffold_4 No
AL6G05320 aly name=fgenesh2_kg.6__507__AT5G05710.1;pid=487373;prot=eq;tid=487373 + scaffold_6 No
AT2G29700 ath Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension;pleckstrin homologue 1 transcript=eq;prot=eq; + 2 No
AT5G05710 ath Pleckstrin homology (PH) domain superfamily protein; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: pleckstrin homologue 1 (TAIR:AT2G29700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Pleckstrin homology (PH) domain superfamily protein transcript=eq;prot=eq; + 5 No
BD2G23770 bdi protein serine/threonine kinase activity, ATP binding (Blast2GO) pid=Bradi2g23770.1;tid=Bradi2g23770.1;GeneName=Bradi2g23770;transcript=eq;prot=eq + Bd2 No
BD2G55360 bdi Rho GTPase binding (Blast2GO) pid=Bradi2g55360.1;tid=Bradi2g55360.1;GeneName=Bradi2g55360;transcript=eq;prot=eq + Bd2 No
CP00019G01910 cpa name=evm.TU.supercontig_19.192;pid=evm.TU.supercontig_19.192;prot=eq;transcript=eq + supercontig_19 No
CP00112G00370 cpa name=evm.TU.supercontig_112.37;pid=evm.TU.supercontig_112.37;prot=eq;transcript=eq - supercontig_112 No
CR12G13620 cre name=fgenesh2_pg.C_scaffold_20000171;pid=173322;prot=eq;tid=173322;transcript=eq + chromosome_12 No
CR12G13630 cre name=pm.chromosome_12_#_753;pid=339729;prot=eq;tid=339736;transcript=eq + chromosome_12 Yes
CR14G01320 cre name=estExt_fgenesh1_pm.C_chromosome_140042;pid=380978;prot=eq;tid=380985;transcript=eq - chromosome_14 No
CR14G01630 cre name=pg.chromosome_14_#_102;pid=331637;prot=eq;tid=331644;transcript=eq - chromosome_14 Yes
FV3G22190 fve Pleckstrin homology domain-containing protein 1 (AtPH1) (similar to) transcript=eq;prot=eq;pid=gene07875 + LG3 No
FV6G49160 fve Pleckstrin homology domain-containing protein 1 (AtPH1) (similar to) transcript=eq;prot=eq;pid=gene09612 + LG6 No
FV7G29160 fve Pleckstrin homology domain-containing protein 1 (AtPH1) (putative) transcript=eq;prot=eq;pid=gene20940 - LG7 No
FV7G29180 fve Pleckstrin homology domain-containing protein 1 (AtPH1) (similar to) transcript=eq;prot=eq;pid=gene20942 - LG7 No
GM02G42330 gma 02 pid=16249900;transcript=eq;prot=eq;name=Glyma02g42330.1 - Gm02 No
GM06G37990 gma 06 pid=16264505;transcript=eq;prot=eq;name=Glyma06g37990.1 - Gm06 No
GM06G42420 gma 06 pid=16264943;transcript=eq;prot=eq;name=Glyma06g42420.1 - Gm06 No
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