Gene family  

Sub-families
ORTHO002060 (34 genes in 25 species)
ORTHO022748 (5 genes in 5 species)
ORTHO029114 (4 genes in 4 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (3 genes)
mtr
Medicago truncatula (4 genes)
olu
Ostreococcus lucimarinus (3 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (4 genes)



The gene family HOM001924 has 64 genes in 25 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 64 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G09200 aly name=scaffold_50700001.1;pid=920754;prot=eq;tid=952267 - scaffold_507 No
AL0G09210 aly name=Al_scaffold_0507_2;pid=856103;prot=eq;tid=887616 - scaffold_507 No
AL4G20530 aly name=scaffold_402119.1;pid=902618;prot=eq;tid=934131 + scaffold_4 No
AL7G25010 aly name=fgenesh1_pm.C_scaffold_7001965;pid=329738;prot=eq;tid=329738 - scaffold_7 No
AL8G01420 aly name=fgenesh2_kg.8__119__AT5G46750.1;pid=494303;prot=eq;tid=494303 + scaffold_8 No
AT2G35210 ath A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.;root and pollen arfgap transcript=eq;prot=eq; + 2 No
AT4G17890 ath A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.;ARF-GAP domain 8 transcript=eq;prot=eq; + 4 No
AT5G46750 ath A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.;ARF-GAP domain 9 transcript=eq;prot=eq; - 5 No
BD1G01090 bdi GTP binding (Blast2GO) pid=Bradi1g01090.1;tid=Bradi1g01090.1;GeneName=Bradi1g01090;transcript=eq;prot=eq - Bd1 No
BD3G34180 bdi protein kinase binding, zinc ion binding, phosphatidylinositol-3,4,5-triphosphate binding (Blast2GO) pid=Bradi3g34180.1;tid=Bradi3g34180.1;GeneName=Bradi3g34180;transcript=eq;prot=eq - Bd3 No
CP00090G00400 cpa name=evm.TU.supercontig_90.40;pid=evm.TU.supercontig_90.40;prot=eq;transcript=eq - supercontig_90 No
CP38992G00010 cpa name=evm.TU.contig_38992.1;pid=evm.TU.contig_38992.1;prot=eq;transcript=eq + contig_38992 Yes
CR09G00090 cre name=Chlre2_kg.scaffold_25000195;pid=149716;prot=eq;tid=149716;transcript=eq - chromosome_9 No
CR17G04070 cre name=pasa_Sanger_mRNA17493;pid=410161;prot=eq;tid=407839;transcript=eq - chromosome_17 No
FV5G29580 fve Probable ADP-ribosylation factor GTPase-activating protein AGD8 (ARF GAP AGD8) (similar to) transcript=eq;prot=eq;pid=gene10499 - LG5 No
GM01G12340 gma 01 pid=16243990;transcript=eq;prot=eq;name=Glyma01g12340.1 - Gm01 No
GM08G36700 gma 08 pid=16273013;transcript=eq;prot=eq;name=Glyma08g36700.1 - Gm08 No
LJ0G154970 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_048603;name=LjSGA_048603.1 + LjSGA_048603 No
LJ0G227530 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_074247;name=LjSGA_074247.2 + LjSGA_074247 No
MD00G059800 mdo transcript=eq;prot=eq;pid=MDP0000569693;tid=MDP0000569693;contig=MDC002479.324 - MDC002479.324 No
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