Gene family  

Sub-families
ORTHO000760 (48 genes in 25 species)
ORTHO035265 (3 genes in 1 species)
ORTHO039594 (3 genes in 3 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (4 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (3 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (2 genes)



The gene family HOM001859 has 66 genes in 25 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 66 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G13840 aly name=scaffold_801396.1;pid=917996;prot=eq;tid=949509 - scaffold_8 No
AT5G49960 ath unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1012 (InterPro:IPR010420); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD1G02000 bdi potassium channel activity (Blast2GO) pid=Bradi1g02000.1;tid=Bradi1g02000.1;GeneName=Bradi1g02000;transcript=eq;prot=eq - Bd1 No
BD2G56274 bdi pid=Bradi2g56274.1;tid=Bradi2g56274.1;GeneName=Bradi2g56274;transcript=eq;prot=eq - Bd2 No
CP00009G03710 cpa name=evm.TU.supercontig_9.371;pid=evm.TU.supercontig_9.371;prot=eq;transcript=eq + supercontig_9 No
CP00009G03740 cpa name=evm.TU.supercontig_9.374;pid=evm.TU.supercontig_9.374;prot=eq;transcript=eq + supercontig_9 No
CP00113G00490 cpa name=evm.TU.supercontig_113.49;pid=evm.TU.supercontig_113.49;prot=eq;transcript=eq + supercontig_113 No
CP47972G00010 cpa name=evm.TU.contig_47972.1;pid=evm.TU.contig_47972.1;prot=eq;transcript=eq + contig_47972 No
CR02G11300 cre name=au.g9310_t1;pid=291358;prot=eq;tid=291365;transcript=eq + chromosome_2 No
CR16G07340 cre name=Chlre2_kg.scaffold_14000166;pid=145533;prot=eq;tid=145533;transcript=eq - chromosome_16 Yes
FV0G45750 fve Probable ion channel DMI1-like, chloroplastic, Precursor (similar to) transcript=eq;prot=eq;pid=gene28813 - scf0513090 No
FV6G21190 fve Putative ion channel DMI-1 transcript=eq;prot=eq;pid=gene17682 + LG6 No
GM12G28860 gma 12 pid=16288226;transcript=eq;prot=eq;name=Glyma12g28860.1 + Gm12 No
GM16G00500 gma 16 pid=16300981;transcript=eq;prot=eq;name=Glyma16g00500.1 + Gm16 No
GM19G45310 gma 19 pid=16315019;transcript=eq;prot=eq;name=Glyma19g45310.1 - Gm19 No
LJ0G422840 lja partial;prot=eq;transcript=eq;scaffold=LjT04C06;name=LjT04C06.160.nd + chr0 No
LJ0G445190 lja partial;prot=eq;transcript=eq;scaffold=LjT04D09;name=LjT04D09.50.nd + chr0 No
LJ1G057730 lja prot=eq;transcript=eq;scaffold=CM0105;name=chr1.CM0105.950.nc + chr1 No
LJ5G028060 lja partial;prot=eq;transcript=eq;scaffold=CM0200;name=chr5.CM0200.460.nc - chr5 No
LJ6G020220 lja prot=eq;transcript=eq;scaffold=CM0885;name=chr6.CM0885.250.nc - chr6 No
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