Gene family  

Sub-families
ORTHO000562 (54 genes in 19 species)
ORTHO047089 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (5 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (3 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (4 genes)



The gene family HOM001837 has 67 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 67 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G18550 aly name=fgenesh2_kg.2__1270__AT1G70160.1;pid=476140;prot=eq;tid=476140 + scaffold_2 No
AL2G20370 aly name=scaffold_202080.1;pid=895006;prot=eq;tid=926519 - scaffold_2 No
AL4G04700 aly name=Al_scaffold_0004_449;pid=868286;prot=eq;tid=899799 + scaffold_4 No
AL6G25360 aly name=fgenesh1_pg.C_scaffold_6002130;pid=351537;prot=eq;tid=351537 + scaffold_6 No
AL7G14980 aly name=scaffold_701588.1;pid=913846;prot=eq;tid=945359 + scaffold_7 No
AL8G20200 aly name=fgenesh1_pm.C_scaffold_8001171;pid=331828;prot=eq;tid=331828 + scaffold_8 No
AT1G70160 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). transcript=eq;prot=eq; + 1 No
AT4G27020 ath unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; - 4 No
AT5G54870 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). transcript=eq;prot=eq; + 5 No
BD2G52270 bdi pid=Bradi2g52270.1;tid=Bradi2g52270.1;GeneName=Bradi2g52270;transcript=eq;prot=eq - Bd2 No
BD2G52280 bdi pid=Bradi2g52280.1;tid=Bradi2g52280.1;GeneName=Bradi2g52280;transcript=eq;prot=eq - Bd2 No
BD3G36160 bdi pid=Bradi3g36160.1;tid=Bradi3g36160.1;GeneName=Bradi3g36160;transcript=eq;prot=eq + Bd3 No
BD4G29590 bdi pid=Bradi4g29590.1;tid=Bradi4g29590.1;GeneName=Bradi4g29590;transcript=eq;prot=eq + Bd4 No
CP00005G03260 cpa name=evm.TU.supercontig_5.326;pid=evm.TU.supercontig_5.326;prot=eq;transcript=eq + supercontig_5 No
CP00097G00220 cpa name=evm.TU.supercontig_97.22;pid=evm.TU.supercontig_97.22;prot=eq;transcript=eq - supercontig_97 No
CP00097G00260 cpa name=evm.TU.supercontig_97.26;pid=evm.TU.supercontig_97.26;prot=eq;transcript=eq - supercontig_97 No
FV3G24660 fve Inositol-1,4,5-trisphosphate 5-phosphatase 4 (probable) transcript=eq;prot=eq;pid=gene03354 + LG3 No
FV4G22530 fve Zinc finger MYND domain-containing protein 15 (probable) transcript=eq;prot=eq;pid=gene00725 - LG4 No
GM01G04400 gma 01 pid=16243382;transcript=eq;prot=eq;name=Glyma01g04400.1 - Gm01 No
GM02G03160 gma 02 pid=16246812;transcript=eq;prot=eq;name=Glyma02g03160.1 + Gm02 No
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