Gene family  

Sub-families
ORTHO002510 (32 genes in 22 species)
ORTHO020275 (6 genes in 1 species)
ORTHO026464 (4 genes in 4 species)
View all sub-families (10)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (5 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (12 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (5 genes)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (4 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM001831 has 67 genes in 25 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 67 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G00860 aly name=fgenesh2_kg.6__83__AT5G01260.2;pid=486949;prot=eq;tid=486949 - scaffold_6 No
AT5G01260 ath Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Carbohydrate-binding-like fold transcript=eq;prot=eq; + 5 No
BD2G23780 bdi pid=Bradi2g23780.1;tid=Bradi2g23780.1;GeneName=Bradi2g23780;transcript=eq;prot=eq + Bd2 No
BD2G55380 bdi pid=Bradi2g55380.1;tid=Bradi2g55380.1;GeneName=Bradi2g55380;transcript=eq;prot=eq + Bd2 No
CP00112G00330 cpa name=evm.TU.supercontig_112.33;pid=evm.TU.supercontig_112.33;prot=eq;transcript=eq - supercontig_112 No
CP00163G00130 cpa name=evm.TU.supercontig_163.13;pid=evm.TU.supercontig_163.13;prot=eq;transcript=eq + supercontig_163 No
CR02G03880 cre name=au.g8634_t2;pid=290629;prot=eq;tid=290636;transcript=eq - chromosome_2 No
CR03G07250 cre name=estExt_fgenesh1_pm.C_chromosome_30366;pid=377743;prot=eq;tid=377750;transcript=eq + chromosome_3 No
CR06G04370 cre name=pasa_Sanger_mRNA27915;pid=403088;prot=eq;tid=418392;transcript=eq - chromosome_6 No
CR09G04500 cre name=pasa_Sanger_mRNA33481;pid=399392;prot=eq;tid=424003;transcript=eq - chromosome_9 No
CR09G06130 cre name=Chlre2_kg.scaffold_30000131;pid=150073;prot=eq;tid=150073;transcript=eq - chromosome_9 No
FV3G22240 fve Pentatricopeptide repeat-containing protein At2g29760, chloroplastic, Precursor (similar to) transcript=eq;prot=eq;pid=gene07880 + LG3 No
FV6G10680 fve Alpha-amylase, Precursor (probable) transcript=eq;prot=eq;pid=gene18850 - LG6 No
GM00G00600 gma 165 pid=16242879;transcript=eq;prot=eq;name=Glyma0165s00200.1 - scaffold_165 No
GM00G00680 gma 304 pid=16250603;transcript=eq;prot=eq;name=Glyma0304s00210.1 + scaffold_304 No
GM00G00920 gma 1061 pid=16278074;transcript=eq;prot=eq;name=Glyma1061s00200.1 - scaffold_1061 No
GM01G28520 gma 01 pid=16244653;transcript=eq;prot=eq;name=Glyma01g28520.1 + Gm01 No
GM03G08820 gma 03 pid=16251503;transcript=eq;prot=eq;name=Glyma03g08820.1 - Gm03 No
GM03G08850 gma 03 pid=16251506;transcript=eq;prot=eq;name=Glyma03g08850.1 - Gm03 No
GM03G08880 gma 03 pid=16251509;transcript=eq;prot=eq;name=Glyma03g08880.1 - Gm03 No
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