Gene family  

Sub-families
ORTHO010908 (18 genes in 18 species)
ORTHO011406 (17 genes in 15 species)
ORTHO018204 (7 genes in 7 species)
View all sub-families (9)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (3 genes)
gma
Glycine max (5 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (5 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (5 genes)



The gene family HOM001774 has 68 genes in 22 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 68 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G22940 aly name=fgenesh2_kg.5__1668__AT3G53010.1;pid=485676;prot=eq;tid=485676 - scaffold_5 No
AL7G06790 aly name=fgenesh2_kg.7__684__AT4G34215.2;pid=491251;prot=eq;tid=491251 + scaffold_7 No
AT3G53010 ath Domain of unknown function (DUF303) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species: Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).;Domain of unknown function (DUF303) transcript=eq;prot=eq; - 3 No
AT4G34215 ath Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.;Domain of unknown function (DUF303) transcript=eq;prot=eq; - 4 No
BD1G00920 bdi pid=Bradi1g00920.1;tid=Bradi1g00920.1;GeneName=Bradi1g00920;transcript=eq;prot=eq - Bd1 No
BD1G00930 bdi pid=Bradi1g00930.1;tid=Bradi1g00930.1;GeneName=Bradi1g00930;transcript=eq;prot=eq + Bd1 No
BD5G01970 bdi pid=Bradi5g01970.1;tid=Bradi5g01970.1;GeneName=Bradi5g01970;transcript=eq;prot=eq - Bd5 No
BD5G03767 bdi pid=Bradi5g03767.1;tid=Bradi5g03767.1;GeneName=Bradi5g03767;transcript=eq;prot=eq + Bd5 No
CP00021G01440 cpa name=evm.TU.supercontig_21.144;pid=evm.TU.supercontig_21.144;prot=eq;transcript=eq + supercontig_21 No
CP00106G00820 cpa name=evm.TU.supercontig_106.82;pid=evm.TU.supercontig_106.82;prot=eq;transcript=eq - supercontig_106 No
CR20G00560 cre name=pasa_Sanger_mRNA34430;pid=403479;prot=eq;tid=424988;transcript=eq + scaffold_20 Yes
FV2G33130 fve Probable carbohydrate esterase At4g34215 (similar to) transcript=eq;prot=eq;pid=gene00186 + LG2 No
FV2G33140 fve Probable carbohydrate esterase At4g34215 (similar to) transcript=eq;prot=eq;pid=gene00187 + LG2 No
FV6G38640 fve Probable carbohydrate esterase At4g34215 (similar to) transcript=eq;prot=eq;pid=gene26277 - LG6 No
GM04G04480 gma 04 pid=16254841;transcript=eq;prot=eq;name=Glyma04g04480.1 - Gm04 No
GM06G04600 gma 06 pid=16261705;transcript=eq;prot=eq;name=Glyma06g04600.1 - Gm06 No
GM14G09520 gma 14 pid=16294960;transcript=eq;prot=eq;name=Glyma14g09520.1 - Gm14 No
GM17G35630 gma 17 pid=16307157;transcript=eq;prot=eq;name=Glyma17g35630.1 + Gm17 No
GM20G26520 gma 20 pid=16316921;transcript=eq;prot=eq;name=Glyma20g26520.1 + Gm20 No
LJ0G165780 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_052124;name=LjSGA_052124.1 - LjSGA_052124 No
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