Gene family  

Sub-families
ORTHO005889 (25 genes in 22 species)
ORTHO009184 (20 genes in 18 species)
ORTHO024265 (5 genes in 1 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (7 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (3 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family HOM001751 has 69 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 69 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G33460 aly name=fgenesh2_kg.1__3365__AT1G32220.1;pid=473411;prot=eq;tid=473411 + scaffold_1 No
AL6G10450 aly name=scaffold_601088.1;pid=909031;prot=eq;tid=940544 - scaffold_6 No
AL6G15760 aly name=fgenesh2_kg.6__1573__AT5G15910.1;pid=488439;prot=eq;tid=488439 + scaffold_6 No
AL6G28400 aly name=Al_scaffold_0006_2741;pid=863232;prot=eq;tid=894745 + scaffold_6 No
AL7G38130 aly name=scaffold_704021.1;pid=916279;prot=eq;tid=947792 - scaffold_7 No
AT1G32220 ath NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 840 Blast hits to 838 proteins in 330 species: Archae - 22; Bacteria - 387; Metazoa - 19; Fungi - 146; Plants - 128; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; + 1 No
AT5G10730 ath NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; - 5 No
AT5G15910 ath NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; + 5 No
BD4G08550 bdi pid=Bradi4g08550.1;tid=Bradi4g08550.1;GeneName=Bradi4g08550;transcript=eq;prot=eq + Bd4 No
BD5G08820 bdi pid=Bradi5g08820.1;tid=Bradi5g08820.1;GeneName=Bradi5g08820;transcript=eq;prot=eq + Bd5 No
CP00023G00420 cpa name=evm.TU.supercontig_23.42;pid=evm.TU.supercontig_23.42;prot=eq;transcript=eq - supercontig_23 No
CP00208G00050 cpa name=evm.TU.supercontig_208.5;pid=evm.TU.supercontig_208.5;prot=eq;transcript=eq + supercontig_208 No
CR03G10520 cre name=pasa_Sanger_mRNA24057;pid=418444;prot=eq;tid=414498;transcript=eq - chromosome_3 No
FV0G29700 fve hypothetical protein transcript=eq;prot=eq;pid=gene13735 + scf0513178 No
FV2G52620 fve hypothetical protein transcript=eq;prot=eq;pid=gene14980 - LG2 No
GM00G00725 gma 404 pid=16254286;transcript=eq;prot=eq;name=Glyma0404s00200.1 + scaffold_404 No
GM01G01830 gma 01 pid=16243080;transcript=eq;prot=eq;name=Glyma01g01830.1 + Gm01 No
GM04G06210 gma 04 pid=16255039;transcript=eq;prot=eq;name=Glyma04g06210.1 - Gm04 No
GM06G06200 gma 06 pid=16261900;transcript=eq;prot=eq;name=Glyma06g06200.1 - Gm06 No
GM06G06230 gma 06 pid=16261903;transcript=eq;prot=eq;name=Glyma06g06230.1 - Gm06 No
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