Gene family 
- Id
- HOM001751
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO005889 (25 genes in 22 species)
ORTHO009184 (20 genes in 18 species)
ORTHO024265 (5 genes in 1 species)
View all sub-families (6)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (5 genes)
- ath
- Arabidopsis thaliana (3 genes)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (2 genes)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (8 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (4 genes)
- mes
- Manihot esculenta (4 genes)
- mrcc299
- Micromonas sp. RCC299 (2 genes)
- mtr
- Medicago truncatula (3 genes)
- olu
- Ostreococcus lucimarinus (1 gene)
- osa
- Oryza sativa ssp. japonica (2 genes)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ota
- Ostreococcus tauri (1 gene)
- ppa
- Physcomitrella patens (4 genes)
- ptr
- Populus trichocarpa (7 genes)
- rco
- Ricinus communis (3 genes)
- sbi
- Sorghum bicolor (2 genes)
- smo
- Selaginella moellendorffii (2 genes)
- tca
- Theobroma cacao (3 genes)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (2 genes)
- zma
- Zea mays (2 genes)
The gene family HOM001751 has 69 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM001751
Page 1 of 4, showing 20 records out of 69 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
AL1G33460 | aly | name=fgenesh2_kg.1__3365__AT1G32220.1;pid=473411;prot=eq;tid=473411 | + | scaffold_1 | No | |
AL6G10450 | aly | name=scaffold_601088.1;pid=909031;prot=eq;tid=940544 | - | scaffold_6 | No | |
AL6G15760 | aly | name=fgenesh2_kg.6__1573__AT5G15910.1;pid=488439;prot=eq;tid=488439 | + | scaffold_6 | No | |
AL6G28400 | aly | name=Al_scaffold_0006_2741;pid=863232;prot=eq;tid=894745 | + | scaffold_6 | No | |
AL7G38130 | aly | name=scaffold_704021.1;pid=916279;prot=eq;tid=947792 | - | scaffold_7 | No | |
AT1G32220 | ath | NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 840 Blast hits to 838 proteins in 330 species: Archae - 22; Bacteria - 387; Metazoa - 19; Fungi - 146; Plants - 128; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein | transcript=eq;prot=eq; | + | 1 | No |
AT5G10730 | ath | NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G15910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein | transcript=eq;prot=eq; | - | 5 | No |
AT5G15910 | ath | NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;NAD(P)-binding Rossmann-fold superfamily protein | transcript=eq;prot=eq; | + | 5 | No |
BD4G08550 | bdi | pid=Bradi4g08550.1;tid=Bradi4g08550.1;GeneName=Bradi4g08550;transcript=eq;prot=eq | + | Bd4 | No | |
BD5G08820 | bdi | pid=Bradi5g08820.1;tid=Bradi5g08820.1;GeneName=Bradi5g08820;transcript=eq;prot=eq | + | Bd5 | No | |
CP00023G00420 | cpa | name=evm.TU.supercontig_23.42;pid=evm.TU.supercontig_23.42;prot=eq;transcript=eq | - | supercontig_23 | No | |
CP00208G00050 | cpa | name=evm.TU.supercontig_208.5;pid=evm.TU.supercontig_208.5;prot=eq;transcript=eq | + | supercontig_208 | No | |
CR03G10520 | cre | name=pasa_Sanger_mRNA24057;pid=418444;prot=eq;tid=414498;transcript=eq | - | chromosome_3 | No | |
FV0G29700 | fve | hypothetical protein | transcript=eq;prot=eq;pid=gene13735 | + | scf0513178 | No |
FV2G52620 | fve | hypothetical protein | transcript=eq;prot=eq;pid=gene14980 | - | LG2 | No |
GM00G00725 | gma | 404 | pid=16254286;transcript=eq;prot=eq;name=Glyma0404s00200.1 | + | scaffold_404 | No |
GM01G01830 | gma | 01 | pid=16243080;transcript=eq;prot=eq;name=Glyma01g01830.1 | + | Gm01 | No |
GM04G06210 | gma | 04 | pid=16255039;transcript=eq;prot=eq;name=Glyma04g06210.1 | - | Gm04 | No |
GM06G06200 | gma | 06 | pid=16261900;transcript=eq;prot=eq;name=Glyma06g06200.1 | - | Gm06 | No |
GM06G06230 | gma | 06 | pid=16261903;transcript=eq;prot=eq;name=Glyma06g06230.1 | - | Gm06 | No |