Gene family  

Sub-families
ORTHO003190 (30 genes in 18 species)
ORTHO013357 (14 genes in 10 species)
ORTHO018255 (7 genes in 5 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (7 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (8 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (5 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (5 genes)



The gene family HOM001702 has 70 genes in 20 species (10 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 70 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G29340 aly name=fgenesh2_kg.7__2856__AT4G14746.1;pid=493423;prot=eq;tid=493423 + scaffold_7 No
AT4G14746 ath CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). transcript=eq;prot=eq; - 4 No
BD1G74400 bdi pid=Bradi1g74400.1;tid=Bradi1g74400.1;GeneName=Bradi1g74400;transcript=eq;prot=eq - Bd1 No
BD4G15170 bdi pid=Bradi4g15170.1;tid=Bradi4g15170.1;GeneName=Bradi4g15170;transcript=eq;prot=eq - Bd4 No
CP00044G01110 cpa name=evm.TU.supercontig_44.111;pid=evm.TU.supercontig_44.111;prot=eq;transcript=eq + supercontig_44 No
CP00117G00790 cpa name=evm.TU.supercontig_117.79;pid=evm.TU.supercontig_117.79;prot=eq;transcript=eq + supercontig_117 No
FV0G25270 fve Slit homolog 2 protein C-product, Precursor (probable) transcript=eq;prot=eq;pid=gene16543 + scf0513168 No
FV0G25280 fve Slit homolog 2 protein C-product, Precursor (probable) transcript=eq;prot=eq;pid=gene16544 + scf0513168 No
FV6G16860 fve Angiopoietin-1 receptor (hTIE2), Precursor (probable) transcript=eq;prot=eq;pid=gene06002 + LG6 Yes
GM02G00720 gma 02 pid=16246524;transcript=eq;prot=eq;name=Glyma02g00720.1 + Gm02 Yes
GM02G00730 gma 02 pid=16246525;transcript=eq;prot=eq;name=Glyma02g00730.1 + Gm02 No
GM08G22220 gma 08 pid=16272064;transcript=eq;prot=eq;name=Glyma08g22220.1 + Gm08 No
GM10G00620 gma 10 pid=16278124;transcript=eq;prot=eq;name=Glyma10g00620.1 - Gm10 No
GM10G30340 gma 10 pid=16280455;transcript=eq;prot=eq;name=Glyma10g30340.1 + Gm10 No
GM10G39010 gma 10 pid=16281470;transcript=eq;prot=eq;name=Glyma10g39010.1 - Gm10 No
GM20G36700 gma 20 pid=16318096;transcript=eq;prot=eq;name=Glyma20g36700.1 + Gm20 No
LJ0G461960 lja partial;prot=eq;transcript=eq;scaffold=LjT09C09;name=LjT09C09.60.nd - chr0 No
LJ0G461970 lja partial;prot=eq;transcript=eq;scaffold=LjT09C09;name=LjT09C09.70.nd - chr0 No
MD00G279870 mdo transcript=eq;prot=eq;pid=MDP0000126669;tid=MDP0000126669;contig=MDC011982.236 - MDC011982.236 No
MD00G321310 mdo transcript=eq;prot=eq;pid=MDP0000293165;tid=MDP0000293165;contig=MDC013621.241 - MDC013621.241 No
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