Gene family  

Sub-families
ORTHO008945 (21 genes in 19 species)
ORTHO015878 (9 genes in 8 species)
ORTHO021893 (5 genes in 5 species)
View all sub-families (12)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (7 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (6 genes)
osaindica
Oryza sativa ssp. indica (7 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (4 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family HOM001645 has 72 genes in 20 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 72 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G41620 aly name=fgenesh2_kg.3__3605__AT2G20700.1;pid=480904;prot=eq;tid=480904 - scaffold_3 No
AL7G13560 aly name=fgenesh2_kg.7__1378__AT4G28280.1;pid=491945;prot=eq;tid=491945 - scaffold_7 No
AL8G21620 aly name=fgenesh2_kg.8__1520__AT5G56170.1;pid=495704;prot=eq;tid=495704 + scaffold_8 No
AT2G20700 ath LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (LLG2); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (TAIR:AT4G28280.2); Has 124 Blast hits to 124 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;LORELEI-LIKE-GPI ANCHORED PROTEIN 2 transcript=eq;prot=eq; - 2 No
AT4G26466 ath Encodes a membrane localized (putative GPI-anchored) protein involved in fertilization. Loss of function mutations display defects in fertilization-around 25% of embryo sacs abort.;lorelei transcript=eq;prot=eq; - 4 No
AT4G28280 ath LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (LLG3); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (TAIR:AT2G20700.1).;LORELEI-LIKE-GPI ANCHORED PROTEIN 3 transcript=eq;prot=eq; + 4 No
AT5G56170 ath LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1); BEST Arabidopsis thaliana protein match is: lorelei (TAIR:AT4G26466.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 transcript=eq;prot=eq; + 5 No
BD1G73127 bdi pid=Bradi1g73127.1;tid=Bradi1g73127.1;GeneName=Bradi1g73127;transcript=eq;prot=eq + Bd1 No
BD3G56630 bdi pid=Bradi3g56630.2;tid=Bradi3g56630.2;GeneName=Bradi3g56630;transcript=eq;prot=eq + Bd3 No
BD5G14710 bdi pid=Bradi5g14710.1;tid=Bradi5g14710.1;GeneName=Bradi5g14710;transcript=eq;prot=eq + Bd5 No
CP00012G00760 cpa name=evm.TU.supercontig_12.76;pid=evm.TU.supercontig_12.76;prot=eq;transcript=eq - supercontig_12 No
CP00034G01540 cpa name=evm.TU.supercontig_34.154;pid=evm.TU.supercontig_34.154;prot=eq;transcript=eq + supercontig_34 No
FV3G34680 fve GPI-anchored protein LORELEI, Precursor (similar to) transcript=eq;prot=eq;pid=gene01443 - LG3 No
GM04G12470 gma 04 pid=16255741;transcript=eq;prot=eq;name=Glyma04g12470.1 + Gm04 No
GM04G12480 gma 04 pid=16255742;transcript=eq;prot=eq;name=Glyma04g12480.1 + Gm04 No
GM06G45840 gma 06 pid=16265300;transcript=eq;prot=eq;name=Glyma06g45840.1 - Gm06 No
GM06G48040 gma 06 pid=16265550;transcript=eq;prot=eq;name=Glyma06g48040.1 - Gm06 No
GM06G48050 gma 06 pid=16265551;transcript=eq;prot=eq;name=Glyma06g48050.1 - Gm06 No
GM12G12650 gma 12 pid=16287280;transcript=eq;prot=eq;name=Glyma12g12650.1 + Gm12 No
GM13G37330 gma 13 pid=16292924;transcript=eq;prot=eq;name=Glyma13g37330.1 - Gm13 No
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