Gene family 
- Id
- HOM001645
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO008945 (21 genes in 19 species)
ORTHO015878 (9 genes in 8 species)
ORTHO021893 (5 genes in 5 species)
View all sub-families (12)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (3 genes)
- ath
- Arabidopsis thaliana (4 genes)
- bdi
- Brachypodium distachyon (3 genes)
- cpa
- Carica papaya (2 genes)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (7 genes)
- lja
- Lotus japonicus (2 genes)
- mdo
- Malus domestica (4 genes)
- mes
- Manihot esculenta (3 genes)
- mtr
- Medicago truncatula (6 genes)
- osa
- Oryza sativa ssp. japonica (6 genes)
- osaindica
- Oryza sativa ssp. indica (7 genes)
- ppa
- Physcomitrella patens (5 genes)
- ptr
- Populus trichocarpa (3 genes)
- rco
- Ricinus communis (3 genes)
- sbi
- Sorghum bicolor (3 genes)
- smo
- Selaginella moellendorffii (4 genes)
- tca
- Theobroma cacao (2 genes)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (3 genes)
The gene family HOM001645 has 72 genes in 20 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM001645
Page 1 of 4, showing 20 records out of 72 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL3G41620 | aly | name=fgenesh2_kg.3__3605__AT2G20700.1;pid=480904;prot=eq;tid=480904 | - | scaffold_3 | No | |
| AL7G13560 | aly | name=fgenesh2_kg.7__1378__AT4G28280.1;pid=491945;prot=eq;tid=491945 | - | scaffold_7 | No | |
| AL8G21620 | aly | name=fgenesh2_kg.8__1520__AT5G56170.1;pid=495704;prot=eq;tid=495704 | + | scaffold_8 | No | |
| AT2G20700 | ath | LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (LLG2); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (TAIR:AT4G28280.2); Has 124 Blast hits to 124 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;LORELEI-LIKE-GPI ANCHORED PROTEIN 2 | transcript=eq;prot=eq; | - | 2 | No |
| AT4G26466 | ath | Encodes a membrane localized (putative GPI-anchored) protein involved in fertilization. Loss of function mutations display defects in fertilization-around 25% of embryo sacs abort.;lorelei | transcript=eq;prot=eq; | - | 4 | No |
| AT4G28280 | ath | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (LLG3); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (TAIR:AT2G20700.1).;LORELEI-LIKE-GPI ANCHORED PROTEIN 3 | transcript=eq;prot=eq; | + | 4 | No |
| AT5G56170 | ath | LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1); BEST Arabidopsis thaliana protein match is: lorelei (TAIR:AT4G26466.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 | transcript=eq;prot=eq; | + | 5 | No |
| BD1G73127 | bdi | pid=Bradi1g73127.1;tid=Bradi1g73127.1;GeneName=Bradi1g73127;transcript=eq;prot=eq | + | Bd1 | No | |
| BD3G56630 | bdi | pid=Bradi3g56630.2;tid=Bradi3g56630.2;GeneName=Bradi3g56630;transcript=eq;prot=eq | + | Bd3 | No | |
| BD5G14710 | bdi | pid=Bradi5g14710.1;tid=Bradi5g14710.1;GeneName=Bradi5g14710;transcript=eq;prot=eq | + | Bd5 | No | |
| CP00012G00760 | cpa | name=evm.TU.supercontig_12.76;pid=evm.TU.supercontig_12.76;prot=eq;transcript=eq | - | supercontig_12 | No | |
| CP00034G01540 | cpa | name=evm.TU.supercontig_34.154;pid=evm.TU.supercontig_34.154;prot=eq;transcript=eq | + | supercontig_34 | No | |
| FV3G34680 | fve | GPI-anchored protein LORELEI, Precursor (similar to) | transcript=eq;prot=eq;pid=gene01443 | - | LG3 | No |
| GM04G12470 | gma | 04 | pid=16255741;transcript=eq;prot=eq;name=Glyma04g12470.1 | + | Gm04 | No |
| GM04G12480 | gma | 04 | pid=16255742;transcript=eq;prot=eq;name=Glyma04g12480.1 | + | Gm04 | No |
| GM06G45840 | gma | 06 | pid=16265300;transcript=eq;prot=eq;name=Glyma06g45840.1 | - | Gm06 | No |
| GM06G48040 | gma | 06 | pid=16265550;transcript=eq;prot=eq;name=Glyma06g48040.1 | - | Gm06 | No |
| GM06G48050 | gma | 06 | pid=16265551;transcript=eq;prot=eq;name=Glyma06g48050.1 | - | Gm06 | No |
| GM12G12650 | gma | 12 | pid=16287280;transcript=eq;prot=eq;name=Glyma12g12650.1 | + | Gm12 | No |
| GM13G37330 | gma | 13 | pid=16292924;transcript=eq;prot=eq;name=Glyma13g37330.1 | - | Gm13 | No |