Gene family 
- Id
- HOM001261
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO001750 (36 genes in 20 species)
ORTHO002866 (31 genes in 3 species)
ORTHO024450 (5 genes in 1 species)
View all sub-families (7)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (2 genes)
- cpa
- Carica papaya (1 gene)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (33 genes)
- lja
- Lotus japonicus (12 genes)
- mdo
- Malus domestica (7 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (11 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ppa
- Physcomitrella patens (3 genes)
- ptr
- Populus trichocarpa (6 genes)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (3 genes)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family HOM001261 has 91 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM001261
Page 1 of 5, showing 20 records out of 91 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL8G28090 | aly | name=fgenesh2_kg.8__2167__AT5G61820.1;pid=496351;prot=eq;tid=496351 | - | scaffold_8 | No | |
| AT5G61820 | ath | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | transcript=eq;prot=eq; | - | 5 | No |
| BD3G41600 | bdi | pid=Bradi3g41600.1;tid=Bradi3g41600.1;GeneName=Bradi3g41600;transcript=eq;prot=eq | + | Bd3 | No | |
| BD3G41620 | bdi | pid=Bradi3g41620.1;tid=Bradi3g41620.1;GeneName=Bradi3g41620;transcript=eq;prot=eq | + | Bd3 | No | |
| CP00013G01780 | cpa | name=evm.TU.supercontig_13.178;pid=evm.TU.supercontig_13.178;prot=eq;transcript=eq | + | supercontig_13 | No | |
| FV5G32820 | fve | Biotin synthase (probable) | transcript=eq;prot=eq;pid=gene33420 | + | LG5 | No |
| FV5G32830 | fve | Biotin synthase (probable) | transcript=eq;prot=eq;pid=gene33421 | + | LG5 | No |
| GM00G00630 | gma | 217 | pid=16246450;transcript=eq;prot=eq;name=Glyma0217s00200.1 | + | scaffold_217 | No |
| GM01G29720 | gma | 01 | pid=16244760;transcript=eq;prot=eq;name=Glyma01g29720.1 | - | Gm01 | No |
| GM01G29970 | gma | 01 | pid=16244783;transcript=eq;prot=eq;name=Glyma01g29970.1 | - | Gm01 | No |
| GM01G29990 | gma | 01 | pid=16244785;transcript=eq;prot=eq;name=Glyma01g29990.1 | - | Gm01 | No |
| GM01G30000 | gma | 01 | pid=16244786;transcript=eq;prot=eq;name=Glyma01g30000.1 | + | Gm01 | No |
| GM01G30010 | gma | 01 | pid=16244787;transcript=eq;prot=eq;name=Glyma01g30010.1 | + | Gm01 | No |
| GM01G30020 | gma | 01 | pid=16244788;transcript=eq;prot=eq;name=Glyma01g30020.1 | - | Gm01 | No |
| GM01G30030 | gma | 01 | pid=16244789;transcript=eq;prot=eq;name=Glyma01g30030.1 | - | Gm01 | No |
| GM01G30040 | gma | 01 | pid=16244790;transcript=eq;prot=eq;name=Glyma01g30040.1 | - | Gm01 | No |
| GM01G30050 | gma | 01 | pid=16244791;transcript=eq;prot=eq;name=Glyma01g30050.1 | - | Gm01 | No |
| GM03G07800 | gma | 03 | pid=16251412;transcript=eq;prot=eq;name=Glyma03g07800.1 | - | Gm03 | No |
| GM03G14110 | gma | 03 | pid=16251669;transcript=eq;prot=eq;name=Glyma03g14110.1 | - | Gm03 | No |
| GM03G14840 | gma | 03 | pid=16251726;transcript=eq;prot=eq;name=Glyma03g14840.1 | + | Gm03 | No |