Gene family  

Sub-families
ORTHO001750 (36 genes in 20 species)
ORTHO002866 (31 genes in 3 species)
ORTHO024450 (5 genes in 1 species)
View all sub-families (7)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (33 genes)
lja
Lotus japonicus (12 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (11 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM001261 has 91 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 91 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G28090 aly name=fgenesh2_kg.8__2167__AT5G61820.1;pid=496351;prot=eq;tid=496351 - scaffold_8 No
AT5G61820 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD3G41600 bdi pid=Bradi3g41600.1;tid=Bradi3g41600.1;GeneName=Bradi3g41600;transcript=eq;prot=eq + Bd3 No
BD3G41620 bdi pid=Bradi3g41620.1;tid=Bradi3g41620.1;GeneName=Bradi3g41620;transcript=eq;prot=eq + Bd3 No
CP00013G01780 cpa name=evm.TU.supercontig_13.178;pid=evm.TU.supercontig_13.178;prot=eq;transcript=eq + supercontig_13 No
FV5G32820 fve Biotin synthase (probable) transcript=eq;prot=eq;pid=gene33420 + LG5 No
FV5G32830 fve Biotin synthase (probable) transcript=eq;prot=eq;pid=gene33421 + LG5 No
GM00G00630 gma 217 pid=16246450;transcript=eq;prot=eq;name=Glyma0217s00200.1 + scaffold_217 No
GM01G29720 gma 01 pid=16244760;transcript=eq;prot=eq;name=Glyma01g29720.1 - Gm01 No
GM01G29970 gma 01 pid=16244783;transcript=eq;prot=eq;name=Glyma01g29970.1 - Gm01 No
GM01G29990 gma 01 pid=16244785;transcript=eq;prot=eq;name=Glyma01g29990.1 - Gm01 No
GM01G30000 gma 01 pid=16244786;transcript=eq;prot=eq;name=Glyma01g30000.1 + Gm01 No
GM01G30010 gma 01 pid=16244787;transcript=eq;prot=eq;name=Glyma01g30010.1 + Gm01 No
GM01G30020 gma 01 pid=16244788;transcript=eq;prot=eq;name=Glyma01g30020.1 - Gm01 No
GM01G30030 gma 01 pid=16244789;transcript=eq;prot=eq;name=Glyma01g30030.1 - Gm01 No
GM01G30040 gma 01 pid=16244790;transcript=eq;prot=eq;name=Glyma01g30040.1 - Gm01 No
GM01G30050 gma 01 pid=16244791;transcript=eq;prot=eq;name=Glyma01g30050.1 - Gm01 No
GM03G07800 gma 03 pid=16251412;transcript=eq;prot=eq;name=Glyma03g07800.1 - Gm03 No
GM03G14110 gma 03 pid=16251669;transcript=eq;prot=eq;name=Glyma03g14110.1 - Gm03 No
GM03G14840 gma 03 pid=16251726;transcript=eq;prot=eq;name=Glyma03g14840.1 + Gm03 No
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