Gene family  

Sub-families
ORTHO000258 (75 genes in 25 species)
ORTHO075877 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (5 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (8 genes)
mdo
Malus domestica (10 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (4 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (5 genes)



The gene family HOM001218 has 94 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 94 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G00600 aly name=fgenesh2_kg.4__67__AT2G21410.1;pid=481007;prot=eq;tid=481007 + scaffold_4 No
AL4G12890 aly name=scaffold_401298.1;pid=901797;prot=eq;tid=933310 + scaffold_4 No
AL7G00990 aly name=fgenesh2_kg.7__109__AT4G39080.1;pid=490676;prot=eq;tid=490676 + scaffold_7 No
AT2G21410 ath Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.;vacuolar proton ATPase A2 transcript=eq;prot=eq; + 2 No
AT2G28520 ath Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.;vacuolar proton ATPase A1 transcript=eq;prot=eq; + 2 No
AT4G39080 ath Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.;vacuolar proton ATPase A3 transcript=eq;prot=eq; + 4 No
BD1G67960 bdi hydrogen-exporting ATPase activity, phosphorylative mechanism, hydrogen ion transporting ATPase activity, rotational mechanism (Blast2GO) pid=Bradi1g67960.1;tid=Bradi1g67960.1;GeneName=Bradi1g67960;transcript=eq;prot=eq - Bd1 No
BD2G54190 bdi hydrogen-exporting ATPase activity, phosphorylative mechanism, hydrogen ion transporting ATPase activity, rotational mechanism (Blast2GO) pid=Bradi2g54190.1;tid=Bradi2g54190.1;GeneName=Bradi2g54190;transcript=eq;prot=eq + Bd2 No
BD3G22870 bdi hydrogen-exporting ATPase activity, phosphorylative mechanism, hydrogen ion transporting ATPase activity, rotational mechanism (Blast2GO) pid=Bradi3g22870.1;tid=Bradi3g22870.1;GeneName=Bradi3g22870;transcript=eq;prot=eq + Bd3 No
CP00139G00600 cpa name=evm.TU.supercontig_139.60;pid=evm.TU.supercontig_139.60;prot=eq;transcript=eq - supercontig_139 No
CP00150G00490 cpa name=evm.TU.supercontig_150.49;pid=evm.TU.supercontig_150.49;prot=eq;transcript=eq + supercontig_150 No
CP31191G00010 cpa name=evm.TU.contig_31191.1;pid=evm.TU.contig_31191.1;prot=eq;transcript=eq - contig_31191 No
CP31977G00010 cpa name=evm.TU.contig_31977.1;pid=evm.TU.contig_31977.1;prot=eq;transcript=eq - contig_31977 No
CP36691G00010 cpa name=evm.TU.contig_36691.1;pid=evm.TU.contig_36691.1;prot=eq;transcript=eq + contig_36691 No
CR04G01670 cre name=e_gwW.15.118.1;pid=115936;prot=eq;tid=115936;transcript=eq + chromosome_4 No
CR09G03460 cre name=fgenesh1_pm.C_scaffold_25000004;pid=438;prot=eq;tid=438;transcript=eq - chromosome_9 No
CR18G00100 cre name=estExt_gwp_1H.C_410048;pid=131895;prot=eq;tid=131895;transcript=eq + scaffold_18 No
FV2G16720 fve Vacuolar proton translocating ATPase 100 kDa subunit (probable) transcript=eq;prot=eq;pid=gene01610 - LG2 No
FV2G49960 fve Vacuolar proton translocating ATPase 100 kDa subunit (probable) transcript=eq;prot=eq;pid=gene15239 + LG2 No
FV3G30010 fve V-type proton ATPase 116 kDa subunit a isoform 1 (V-ATPase 116 kDa isoform a1) (probable) transcript=eq;prot=eq;pid=gene25340 + LG3 No
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