Gene family  

Sub-families
ORTHO011506 (17 genes in 13 species)
ORTHO018297 (7 genes in 5 species)
ORTHO021861 (5 genes in 5 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (10 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (10 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (8 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ppa
Physcomitrella patens (9 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (5 genes)



The gene family HOM001162 has 98 genes in 20 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 98 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G15670 aly name=fgenesh2_kg.1__1629__AT1G14840.1;pid=471675;prot=eq;tid=471675 - scaffold_1 No
AL1G20430 aly name=fgenesh2_kg.1__2123__AT1G14840.1;pid=472169;prot=eq;tid=472169 + scaffold_1 No
AL1G27910 aly name=scaffold_102992.1;pid=890198;prot=eq;tid=921711 + scaffold_1 No
AL2G16140 aly name=fgenesh2_kg.2__1047__AT1G68060.1;pid=475917;prot=eq;tid=475917 + scaffold_2 No
AL5G00840 aly name=fgenesh2_kg.5__84__AT2G01750.1;pid=484092;prot=eq;tid=484092 + scaffold_5 No
AL7G25840 aly name=scaffold_702739.1;pid=914997;prot=eq;tid=946510 + scaffold_7 No
AT1G14840 ath Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.;microtubule-associated proteins 70-4 transcript=eq;prot=eq; - 1 No
AT1G24764 ath Member of the MAP70 protein family.;microtubule-associated proteins 70-2 transcript=eq;prot=eq; - 1 No
AT1G68060 ath Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues.;microtubule-associated proteins 70-1 transcript=eq;prot=eq; - 1 No
AT2G01750 ath Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.;microtubule-associated proteins 70-3 transcript=eq;prot=eq; + 2 No
AT4G17220 ath Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues.;microtubule-associated proteins 70-5 transcript=eq;prot=eq; - 4 No
BD1G44290 bdi ATPase activity, coupled (Blast2GO) pid=Bradi1g44290.1;tid=Bradi1g44290.1;GeneName=Bradi1g44290;transcript=eq;prot=eq + Bd1 No
BD1G69870 bdi ATPase activity, coupled (Blast2GO) pid=Bradi1g69870.1;tid=Bradi1g69870.1;GeneName=Bradi1g69870;transcript=eq;prot=eq - Bd1 No
BD3G59920 bdi ATPase activity, coupled (Blast2GO) pid=Bradi3g59920.1;tid=Bradi3g59920.1;GeneName=Bradi3g59920;transcript=eq;prot=eq - Bd3 No
BD4G00250 bdi ATPase activity, coupled (Blast2GO) pid=Bradi4g00250.1;tid=Bradi4g00250.1;GeneName=Bradi4g00250;transcript=eq;prot=eq + Bd4 No
CP00002G01790 cpa name=evm.TU.supercontig_2.179;pid=evm.TU.supercontig_2.179;prot=eq;transcript=eq - supercontig_2 No
CP00027G02510 cpa name=evm.TU.supercontig_27.252;pid=evm.TU.supercontig_27.252;prot=eq;transcript=eq - supercontig_27 No
FV0G07780 fve Myosin-7 (MyHC-beta) (probable) transcript=eq;prot=eq;pid=gene06251 + scf0513158 No
FV3G02740 fve Girdin (APE) (probable) transcript=eq;prot=eq;pid=gene19819 + LG3 No
GM02G09390 gma 02 pid=16247510;transcript=eq;prot=eq;name=Glyma02g09390.1 + Gm02 No
<< previous
1 | 2 | 3 | 4 | 5 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier