Gene family  

Sub-families
ORTHO006390 (24 genes in 17 species)
ORTHO007193 (23 genes in 19 species)
ORTHO018964 (6 genes in 5 species)
View all sub-families (12)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (8 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (7 genes)
osa
Oryza sativa ssp. japonica (6 genes)
osaindica
Oryza sativa ssp. indica (8 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (6 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (5 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (8 genes)



The gene family HOM001135 has 100 genes in 20 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 100 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G04710 aly name=fgenesh1_pm.C_scaffold_3000376;pid=317360;prot=eq;tid=317360 - scaffold_3 No
AL3G24940 aly name=fgenesh2_kg.3__2476__AT3G22560.1;pid=479775;prot=eq;tid=479775 - scaffold_3 No
AL4G17050 aly name=scaffold_401752.1;pid=902251;prot=eq;tid=933764 - scaffold_4 No
AL4G17060 aly name=scaffold_401753.1;pid=902252;prot=eq;tid=933765 - scaffold_4 No
AT2G32020 ath Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: response to abscisic acid stimulus, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, cotyledon, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32030.1); Has 10365 Blast hits to 10343 proteins in 1759 species: Archae - 92; Bacteria - 9493; Metazoa - 1; Fungi - 147; Plants - 128; Viruses - 3; Other Eukaryotes - 501 (source: NCBI BLink).;Acyl-CoA N-acyltransferases (NAT) superfamily protein transcript=eq;prot=eq; - 2 No
AT2G32030 ath Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 9856 Blast hits to 9837 proteins in 1766 species: Archae - 84; Bacteria - 9082; Metazoa - 1; Fungi - 109; Plants - 131; Viruses - 3; Other Eukaryotes - 446 (source: NCBI BLink).;Acyl-CoA N-acyltransferases (NAT) superfamily protein transcript=eq;prot=eq; - 2 No
AT3G22560 ath Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G32020.1); Has 8133 Blast hits to 8121 proteins in 1623 species: Archae - 77; Bacteria - 7549; Metazoa - 0; Fungi - 78; Plants - 124; Viruses - 1; Other Eukaryotes - 304 (source: NCBI BLink).;Acyl-CoA N-acyltransferases (NAT) superfamily protein transcript=eq;prot=eq; - 3 No
BD1G05690 bdi N-acetyltransferase activity (Blast2GO) pid=Bradi1g05690.1;tid=Bradi1g05690.1;GeneName=Bradi1g05690;transcript=eq;prot=eq - Bd1 No
BD1G05700 bdi peptide alpha-N-acetyltransferase activity (Blast2GO) pid=Bradi1g05700.1;tid=Bradi1g05700.1;GeneName=Bradi1g05700;transcript=eq;prot=eq - Bd1 No
BD1G05817 bdi pid=Bradi1g05817.1;tid=Bradi1g05817.1;GeneName=Bradi1g05817;transcript=eq;prot=eq - Bd1 No
BD1G12970 bdi N-acetyltransferase activity (Blast2GO) pid=Bradi1g12970.1;tid=Bradi1g12970.1;GeneName=Bradi1g12970;transcript=eq;prot=eq - Bd1 No
CP00058G00790 cpa name=evm.TU.supercontig_58.79;pid=evm.TU.supercontig_58.79;prot=eq;transcript=eq + supercontig_58 No
CP00058G00800 cpa name=evm.TU.supercontig_58.80;pid=evm.TU.supercontig_58.80;prot=eq;transcript=eq - supercontig_58 No
CP00117G00430 cpa name=evm.TU.supercontig_117.43;pid=evm.TU.supercontig_117.43;prot=eq;transcript=eq + supercontig_117 No
CP01119G00010 cpa name=evm.TU.supercontig_1119.1;pid=evm.TU.supercontig_1119.1;prot=eq;transcript=eq + supercontig_1119 No
FV0G00820 fve hypothetical protein transcript=eq;prot=eq;pid=gene03658 - scf0513158 No
FV0G00830 fve hypothetical protein transcript=eq;prot=eq;pid=gene03659 + scf0513158 No
FV0G24470 fve hypothetical protein transcript=eq;prot=eq;pid=gene16464 + scf0513168 No
FV2G20610 fve Putative ribosomal-protein-alanine acetyltransferase (probable) transcript=eq;prot=eq;pid=gene27542 + LG2 No
FV4G19730 fve hypothetical protein transcript=eq;prot=eq;pid=gene20405 + LG4 No
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