Gene family  

Sub-families
ORTHO001646 (36 genes in 24 species)
ORTHO004548 (27 genes in 22 species)
ORTHO040066 (3 genes in 3 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (2 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (12 genes)
mes
Manihot esculenta (5 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (8 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (4 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (10 genes)



The gene family HOM001119 has 101 genes in 25 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 101 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G21350 aly name=fgenesh2_kg.1__2215__AT1G20330.1;pid=472261;prot=eq;tid=472261 - scaffold_1 No
AL2G24970 aly name=scaffold_202560.1;pid=895486;prot=eq;tid=926999 - scaffold_2 No
AL6G13410 aly name=scaffold_601380.1;pid=909323;prot=eq;tid=940836 - scaffold_6 No
AT1G20330 ath Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.;sterol methyltransferase 2 transcript=eq;prot=eq; - 1 No
AT1G76090 ath Encodes S-adenosyl-methionine-sterol-C-methyltransferase, an enzyme in the sterol biosynthetic pathway.;sterol methyltransferase 3 transcript=eq;prot=eq; - 1 No
AT5G13710 ath SMT1 controls the level of cholesterol in plants;sterol methyltransferase 1 transcript=eq;prot=eq; - 5 No
BD1G54305 bdi pid=Bradi1g54305.2;tid=Bradi1g54305.2;GeneName=Bradi1g54305;transcript=eq;prot=eq + Bd1 No
BD1G76020 bdi sterol 24-C-methyltransferase activity (Blast2GO) pid=Bradi1g76020.1;tid=Bradi1g76020.1;GeneName=Bradi1g76020;transcript=eq;prot=eq - Bd1 No
BD3G32420 bdi sterol 24-C-methyltransferase activity (Blast2GO) pid=Bradi3g32420.1;tid=Bradi3g32420.1;GeneName=Bradi3g32420;transcript=eq;prot=eq - Bd3 No
BD3G53987 bdi pid=Bradi3g53987.1;tid=Bradi3g53987.1;GeneName=Bradi3g53987;transcript=eq;prot=eq + Bd3 No
CP00026G02610 cpa name=evm.TU.supercontig_26.261;pid=evm.TU.supercontig_26.261;prot=eq;transcript=eq + supercontig_26 No
CP00125G00310 cpa name=evm.TU.supercontig_125.31;pid=evm.TU.supercontig_125.31;prot=eq;transcript=eq + supercontig_125 No
CR12G03530 cre name=fgenesh2_kg.C_scaffold_11000008;pid=161904;prot=eq;tid=161904;transcript=eq + chromosome_12 No
FV2G37880 fve 24-methylenesterol C-methyltransferase 2 (24-sterol C-methyltransferase 2) (putative) transcript=eq;prot=eq;pid=gene08587 + LG2 No
FV7G19960 fve Cycloartenol-C-24-methyltransferase (Sterol C-methyltransferase 1) (putative) transcript=eq;prot=eq;pid=gene29356 + LG7 No
GM04G02270 gma 04 pid=16254577;transcript=eq;prot=eq;name=Glyma04g02270.1 + Gm04 No
GM06G02330 gma 06 pid=16261444;transcript=eq;prot=eq;name=Glyma06g02330.1 + Gm06 No
GM10G11670 gma 10 pid=16279264;transcript=eq;prot=eq;name=Glyma10g11670.1 + Gm10 No
GM12G01160 gma 12 pid=16285939;transcript=eq;prot=eq;name=Glyma12g01160.1 + Gm12 No
GM12G01170 gma 12 pid=16285940;transcript=eq;prot=eq;name=Glyma12g01170.1 + Gm12 No
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