Gene family  

Sub-families
ORTHO001118 (42 genes in 20 species)
ORTHO005445 (25 genes in 15 species)
ORTHO013830 (13 genes in 12 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (5 genes)
cpa
Carica papaya (5 genes)
fve
Fragaria vesca (5 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (6 genes)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (5 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (7 genes)



The gene family HOM001114 has 101 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 101 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G09890 aly name=fgenesh2_kg.665__2__AT5G61250.2;pid=497509;prot=eq;tid=497509 - scaffold_665 No
AL6G07530 aly name=fgenesh1_pg.C_scaffold_6000635;pid=350042;prot=eq;tid=350042 + scaffold_6 No
AL7G32030 aly name=fgenesh2_kg.7__3015__AT5G34940.2;pid=493582;prot=eq;tid=493582 - scaffold_7 No
AL8G27440 aly name=fgenesh2_kg.8__2096__AT5G61250.2;pid=496280;prot=eq;tid=496280 - scaffold_8 No
AT5G07830 ath Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.;glucuronidase 2 transcript=eq;prot=eq; + 5 No
AT5G34940 ath The protein is predicted (WoLF PSORT program) to be membrane-associated.;glucuronidase 3 transcript=eq;prot=eq; - 5 No
AT5G61250 ath Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.;glucuronidase 1 transcript=eq;prot=eq; - 5 No
BD1G22580 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi1g22580.1;tid=Bradi1g22580.1;GeneName=Bradi1g22580;Name=BdGH79_1;transcript=eq;prot=eq + Bd1 No
BD1G47760 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi1g47760.1;tid=Bradi1g47760.1;GeneName=Bradi1g47760;Name=BdGH79_2;transcript=eq;prot=eq + Bd1 No
BD1G70300 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi1g70300.1;tid=Bradi1g70300.1;GeneName=Bradi1g70300;Name=BdGH79_3;transcript=eq;prot=eq - Bd1 No
BD3G54370 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi3g54370.1;tid=Bradi3g54370.1;GeneName=Bradi3g54370;Name=BdGH79_4;transcript=eq;prot=eq + Bd3 No
BD4G03680 bdi Glycosyl hydrolase (GH), subfamily GH79 pid=Bradi4g03680.1;tid=Bradi4g03680.1;GeneName=Bradi4g03680;Name=BdGH79_5;transcript=eq;prot=eq - Bd4 No
CP00051G01050 cpa name=evm.TU.supercontig_51.105;pid=evm.TU.supercontig_51.105;prot=eq;transcript=eq - supercontig_51 No
CP00051G01060 cpa name=evm.TU.supercontig_51.106;pid=evm.TU.supercontig_51.106;prot=eq;transcript=eq - supercontig_51 No
CP00051G01080 cpa name=evm.TU.supercontig_51.108;pid=evm.TU.supercontig_51.108;prot=eq;transcript=eq - supercontig_51 No
CP00187G00050 cpa name=evm.TU.supercontig_187.5;pid=evm.TU.supercontig_187.5;prot=eq;transcript=eq - supercontig_187 No
CP00277G00040 cpa name=evm.TU.supercontig_277.4;pid=evm.TU.supercontig_277.4;prot=eq;transcript=eq + supercontig_277 No
FV0G04560 fve Heparanase-like protein 2, Precursor (probable) transcript=eq;prot=eq;pid=gene04651 + scf0513158 No
FV1G04250 fve Heparanase-like protein 3, Precursor (putative) transcript=eq;prot=eq;pid=gene30784 + LG1 No
FV2G39620 fve Heparanase-like protein 3, Precursor (similar to) transcript=eq;prot=eq;pid=gene11598 + LG2 No
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