Gene family  

Sub-families
ORTHO005655 (25 genes in 16 species)
ORTHO009126 (20 genes in 18 species)
ORTHO010142 (19 genes in 16 species)
View all sub-families (8)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (6 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (10 genes)
mes
Manihot esculenta (6 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (6 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (7 genes)
rco
Ricinus communis (5 genes)
sbi
Sorghum bicolor (5 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (5 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (5 genes)



The gene family HOM001075 has 105 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 105 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G06820 aly name=scaffold_100728.1;pid=887934;prot=eq;tid=919447 - scaffold_1 No
AL3G02900 aly name=scaffold_300326.1;pid=896356;prot=eq;tid=927869 - scaffold_3 No
AL3G02950 aly name=fgenesh1_pm.C_scaffold_3000250;pid=317234;prot=eq;tid=317234 - scaffold_3 No
AL3G02960 aly name=fgenesh2_kg.3__300__AT3G03540.1;pid=477599;prot=eq;tid=477599 - scaffold_3 No
AL4G09880 aly name=fgenesh2_kg.4__622__AT2G26870.1;pid=481562;prot=eq;tid=481562 - scaffold_4 No
AL5G17510 aly name=Al_scaffold_0005_1678;pid=866199;prot=eq;tid=897712 - scaffold_5 No
AT1G07230 ath non-specific phospholipase C1 (NPC1); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C2 (TAIR:AT2G26870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;non-specific phospholipase C1 transcript=eq;prot=eq; - 1 No
AT2G26870 ath non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).;non-specific phospholipase C2 transcript=eq;prot=eq; - 2 No
AT3G03520 ath Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.;non-specific phospholipase C3 transcript=eq;prot=eq; - 3 No
AT3G03530 ath PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.;non-specific phospholipase C4 transcript=eq;prot=eq; - 3 No
AT3G03540 ath Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.;non-specific phospholipase C5 transcript=eq;prot=eq; - 3 No
AT3G48610 ath non-specific phospholipase C6 (NPC6); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2244 Blast hits to 2129 proteins in 399 species: Archae - 32; Bacteria - 1880; Metazoa - 0; Fungi - 127; Plants - 152; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).;non-specific phospholipase C6 transcript=eq;prot=eq; - 3 No
BD1G01190 bdi pid=Bradi1g01190.1;tid=Bradi1g01190.1;GeneName=Bradi1g01190;transcript=eq;prot=eq + Bd1 No
BD1G03250 bdi pid=Bradi1g03250.2;tid=Bradi1g03250.2;GeneName=Bradi1g03250;transcript=eq;prot=eq - Bd1 No
BD2G03657 bdi pid=Bradi2g03657.1;tid=Bradi2g03657.1;GeneName=Bradi2g03657;transcript=eq;prot=eq - Bd2 No
BD2G61140 bdi pid=Bradi2g61140.1;tid=Bradi2g61140.1;GeneName=Bradi2g61140;transcript=eq;prot=eq - Bd2 No
CP00013G00900 cpa name=evm.TU.supercontig_13.90;pid=evm.TU.supercontig_13.90;prot=eq;transcript=eq + supercontig_13 No
CP00112G00300 cpa name=evm.TU.supercontig_112.30;pid=evm.TU.supercontig_112.30;prot=eq;transcript=eq - supercontig_112 No
CP00157G00610 cpa name=evm.TU.supercontig_157.61;pid=evm.TU.supercontig_157.61;prot=eq;transcript=eq + supercontig_157 No
CP00317G00060 cpa name=evm.TU.supercontig_317.6;pid=evm.TU.supercontig_317.6;prot=eq;transcript=eq + supercontig_317 No
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