Gene family  

Sub-families
ORTHO000299 (70 genes in 20 species)
ORTHO020285 (6 genes in 2 species)
ORTHO047531 (2 genes in 1 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (6 genes)
fve
Fragaria vesca (2 genes)
gma
Glycine max (9 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (18 genes)
mes
Manihot esculenta (6 genes)
mtr
Medicago truncatula (5 genes)
osa
Oryza sativa ssp. japonica (7 genes)
osaindica
Oryza sativa ssp. indica (7 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (5 genes)



The gene family HOM001051 has 106 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 106 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G22040 aly name=fgenesh2_kg.1__2274__AT1G20840.1;pid=472320;prot=eq;tid=472320 - scaffold_1 No
AL5G21140 aly name=Al_scaffold_0005_2014;pid=866535;prot=eq;tid=898048 - scaffold_5 No
AL7G05590 aly name=fgenesh2_kg.7__550__AT4G35300.2;pid=491117;prot=eq;tid=491117 + scaffold_7 No
AT1G20840 ath The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues.;tonoplast monosaccharide transporter1 transcript=eq;prot=eq; - 1 No
AT3G51490 ath tonoplast monosaccharide transporter3 (TMT3); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter2 (TAIR:AT4G35300.4).;tonoplast monosaccharide transporter3 transcript=eq;prot=eq; - 3 No
AT4G35300 ath tonoplast monosaccharide transporter2 (TMT2); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity; INVOLVED IN: response to fructose stimulus, response to salt stress, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2); Has 51368 Blast hits to 39283 proteins in 2480 species: Archae - 776; Bacteria - 26387; Metazoa - 6850; Fungi - 11680; Plants - 3625; Viruses - 0; Other Eukaryotes - 2050 (source: NCBI BLink).;tonoplast monosaccharide transporter2 transcript=eq;prot=eq; - 4 No
BD1G29600 bdi glucose transmembrane transporter activity, galactose transmembrane transporter activity, sugar:hydrogen symporter activity, fructose transmembrane transporter activity, mannose transmembrane transporter activity (Blast2GO) pid=Bradi1g29600.1;tid=Bradi1g29600.1;GeneName=Bradi1g29600;transcript=eq;prot=eq + Bd1 No
BD1G76540 bdi glucose transmembrane transporter activity, galactose transmembrane transporter activity, sugar:hydrogen symporter activity, fructose transmembrane transporter activity, mannose transmembrane transporter activity (Blast2GO) pid=Bradi1g76540.1;tid=Bradi1g76540.1;GeneName=Bradi1g76540;transcript=eq;prot=eq - Bd1 No
BD3G08690 bdi glucose transmembrane transporter activity, galactose transmembrane transporter activity, sugar:hydrogen symporter activity, fructose transmembrane transporter activity, mannose transmembrane transporter activity (Blast2GO) pid=Bradi3g08690.1;tid=Bradi3g08690.1;GeneName=Bradi3g08690;transcript=eq;prot=eq + Bd3 No
BD3G32210 bdi D-glucose transmembrane transporter activity (Blast2GO) pid=Bradi3g32210.2;tid=Bradi3g32210.2;GeneName=Bradi3g32210;transcript=eq;prot=eq + Bd3 No
BD3G60756 bdi pid=Bradi3g60756.1;tid=Bradi3g60756.1;GeneName=Bradi3g60756;transcript=eq;prot=eq + Bd3 No
BD4G13310 bdi D-glucose transmembrane transporter activity (Blast2GO) pid=Bradi4g13310.1;tid=Bradi4g13310.1;GeneName=Bradi4g13310;transcript=eq;prot=eq - Bd4 No
CP00026G01080 cpa name=evm.TU.supercontig_26.108;pid=evm.TU.supercontig_26.108;prot=eq;transcript=eq - supercontig_26 No
CP00026G01130 cpa name=evm.TU.supercontig_26.113;pid=evm.TU.supercontig_26.113;prot=eq;transcript=eq - supercontig_26 No
CP00060G00100 cpa name=evm.TU.supercontig_60.10;pid=evm.TU.supercontig_60.10;prot=eq;transcript=eq + supercontig_60 No
CP00060G00110 cpa name=evm.TU.supercontig_60.11;pid=evm.TU.supercontig_60.11;prot=eq;transcript=eq + supercontig_60 No
CP00091G00440 cpa name=evm.TU.supercontig_91.44;pid=evm.TU.supercontig_91.44;prot=eq;transcript=eq + supercontig_91 No
CP01828G00010 cpa name=evm.TU.supercontig_1828.1;pid=evm.TU.supercontig_1828.1;prot=eq;transcript=eq - supercontig_1828 No
FV1G11900 fve Monosaccharide-sensing protein 2 (similar to) transcript=eq;prot=eq;pid=gene13020 + LG1 No
FV2G12300 fve Monosaccharide-sensing protein 2 (putative) transcript=eq;prot=eq;pid=gene17337 - LG2 No
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