Gene family 
- Id
- HOM001050
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO001326 (39 genes in 19 species)
ORTHO001520 (37 genes in 21 species)
ORTHO072719 (2 genes in 2 species)
View all sub-families (3)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (7 genes)
- ath
- Arabidopsis thaliana (5 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (2 genes)
- fve
- Fragaria vesca (3 genes)
- gma
- Glycine max (6 genes)
- lja
- Lotus japonicus (5 genes)
- mdo
- Malus domestica (12 genes)
- mes
- Manihot esculenta (4 genes)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (3 genes)
- osa
- Oryza sativa ssp. japonica (5 genes)
- osaindica
- Oryza sativa ssp. indica (5 genes)
- ppa
- Physcomitrella patens (5 genes)
- ptr
- Populus trichocarpa (7 genes)
- rco
- Ricinus communis (2 genes)
- sbi
- Sorghum bicolor (6 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (4 genes)
- vvi
- Vitis vinifera (4 genes)
- zma
- Zea mays (14 genes)
The gene family HOM001050 has 106 genes in 21 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM001050
Page 1 of 6, showing 20 records out of 106 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G12330 | aly | name=scaffold_101310.1;pid=888516;prot=eq;tid=920029 | - | scaffold_1 | No | |
| AL1G22160 | aly | name=fgenesh2_kg.1__2287__AT1G20950.1;pid=472333;prot=eq;tid=472333 | - | scaffold_1 | No | |
| AL2G25500 | aly | name=fgenesh2_kg.2__1943__AT1G76550.1;pid=476813;prot=eq;tid=476813 | - | scaffold_2 | No | |
| AL3G33940 | aly | name=Al_scaffold_0003_3295;pid=874654;prot=eq;tid=906167 | + | scaffold_3 | No | |
| AL6G36050 | aly | name=scaffold_603735.1;pid=911678;prot=eq;tid=943191 | + | scaffold_6 | Yes | |
| AL6G36110 | aly | name=fgenesh2_kg.6__3209__AT4G04040.1;pid=490075;prot=eq;tid=490075 | + | scaffold_6 | No | |
| AL7G22650 | aly | name=Al_scaffold_0007_2174;pid=858675;prot=eq;tid=890188 | - | scaffold_7 | No | |
| AT1G12000 | ath | Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink).;Phosphofructokinase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G20950 | ath | Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, photosynthesis, response to glucose stimulus; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G76550.1); Has 4397 Blast hits to 4316 proteins in 1453 species: Archae - 20; Bacteria - 3299; Metazoa - 3; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink).;Phosphofructokinase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G76550 | ath | Phosphofructokinase family protein; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G20950.1); Has 4956 Blast hits to 4876 proteins in 1678 species: Archae - 20; Bacteria - 3823; Metazoa - 10; Fungi - 6; Plants - 430; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink).;Phosphofructokinase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT4G04040 | ath | maternal effect embryo arrest 51 (MEE51); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT1G12000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Phosphofructokinase family protein | transcript=eq;prot=eq; | + | 4 | No |
| AT4G08876 | ath | pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related; BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related | transcript=eq;prot=eq; | + | 4 | No |
| BD1G42630 | bdi | 6-phosphofructokinase activity, diphosphate-fructose-6-phosphate 1-phosphotransferase activity (Blast2GO) | pid=Bradi1g42630.1;tid=Bradi1g42630.1;GeneName=Bradi1g42630;transcript=eq;prot=eq | + | Bd1 | No |
| BD1G44460 | bdi | 6-phosphofructokinase activity, diphosphate-fructose-6-phosphate 1-phosphotransferase activity (Blast2GO) | pid=Bradi1g44460.1;tid=Bradi1g44460.1;GeneName=Bradi1g44460;transcript=eq;prot=eq | + | Bd1 | No |
| BD3G22340 | bdi | 6-phosphofructokinase activity, diphosphate-fructose-6-phosphate 1-phosphotransferase activity (Blast2GO) | pid=Bradi3g22340.1;tid=Bradi3g22340.1;GeneName=Bradi3g22340;transcript=eq;prot=eq | - | Bd3 | No |
| BD3G53260 | bdi | 6-phosphofructokinase activity, diphosphate-fructose-6-phosphate 1-phosphotransferase activity (Blast2GO) | pid=Bradi3g53260.1;tid=Bradi3g53260.1;GeneName=Bradi3g53260;transcript=eq;prot=eq | - | Bd3 | No |
| BD4G27010 | bdi | pid=Bradi4g27010.1;tid=Bradi4g27010.1;GeneName=Bradi4g27010;transcript=eq;prot=eq | - | Bd4 | No | |
| CP01180G00030 | cpa | name=evm.TU.supercontig_1180.3;pid=evm.TU.supercontig_1180.3;prot=eq;transcript=eq | + | supercontig_1180 | No | |
| CP24967G00050 | cpa | name=evm.TU.contig_24967.5;pid=evm.TU.contig_24967.5;prot=eq;transcript=eq | - | contig_24967 | No | |
| FV3G01710 | fve | Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (PFP) (similar to) | transcript=eq;prot=eq;pid=gene19511 | - | LG3 | No |