Gene family  

Sub-families
ORTHO012167 (16 genes in 3 species)
ORTHO025216 (5 genes in 1 species)
ORTHO034365 (3 genes in 2 species)
View all sub-families (10)
 
Keywords


Overview of gene family content




bdi
Brachypodium distachyon (2 genes)
fve
Fragaria vesca (4 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (1 gene)
mtr
Medicago truncatula (3 genes)
osaindica
Oryza sativa ssp. indica (44 genes)
ptr
Populus trichocarpa (8 genes)
sbi
Sorghum bicolor (22 genes)
tca
Theobroma cacao (24 genes)



The gene family HOM001015 has 111 genes in 9 species (34 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 111 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
BD1G15165 bdi pid=Bradi1g15165.1;tid=Bradi1g15165.1;GeneName=Bradi1g15165;transcript=eq;prot=eq - Bd1 No
BD1G46975 bdi pid=Bradi1g46975.1;tid=Bradi1g46975.1;GeneName=Bradi1g46975;transcript=eq;prot=eq + Bd1 No
FV0G16250 fve Hsp70/Hsp90 co-chaperone CNS1 (probable) transcript=eq;prot=eq;pid=gene05393 - scf0513160 No
FV0G53440 fve Translation initiation factor IF-2 (probable) transcript=eq;prot=eq;pid=gene33724 - scf0511318 No
FV3G16200 fve Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (probable) transcript=eq;prot=eq;pid=gene14375 + LG3 No
FV4G09050 fve Copia protease (probable) transcript=eq;prot=eq;pid=gene22461 + LG4 Yes
LJ0G031830 lja prot=eq;transcript=eq;scaffold=LjSGA_014599;name=LjSGA_014599.1 - LjSGA_014599 No
LJ0G057850 lja prot=eq;transcript=eq;scaffold=LjSGA_020923;name=LjSGA_020923.1 + LjSGA_020923 No
LJ2G031720 lja partial;prot=eq;transcript=eq;scaffold=CM0788;name=chr2.CM0788.90.nc - chr2 Yes
MD00G435370 mdo transcript=eq;prot=eq;pid=MDP0000480923;tid=MDP0000480923;contig=MDC019931.207 - MDC019931.207 No
MT2G087650 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr2g087650.1; - 2 Yes
MT4G112730 mtr Glutathione S-transferase (AHRD V1 ***- B2D2J8_BRAOL) transcript=eq;prot=eq;pid=Medtr4g112730.1; + 4 No
MT5G061150 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr5g061150.1; - 5 No
OSINDICA_00G34140 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC048051; + Supscaffold139 No
OSINDICA_00G34150 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC048052; + Supscaffold139 No
OSINDICA_01G16200 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC036433; + Chr01 No
OSINDICA_01G19100 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC036484; - Chr01 No
OSINDICA_01G24960 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC001689; + Chr01 No
OSINDICA_02G07000 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC039477; + Chr02 No
OSINDICA_02G15890 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC013292; - Chr02 No
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