Gene family  

Sub-families
ORTHO000202 (83 genes in 23 species)
ORTHO022052 (5 genes in 5 species)
ORTHO027267 (4 genes in 4 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (7 genes)
ath
Arabidopsis thaliana (6 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (5 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (9 genes)
gma
Glycine max (5 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (8 genes)
mes
Manihot esculenta (5 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (6 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (6 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (14 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (4 genes)
vca
Volvox carteri (3 genes)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (3 genes)



The gene family HOM000980 has 115 genes in 24 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 6, showing 20 records out of 115 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G51590 aly name=scaffold_105492.1;pid=892698;prot=eq;tid=924211 - scaffold_1 No
AL3G00060 aly name=fgenesh2_kg.3__9__AT3G02030.1;pid=477308;prot=eq;tid=477308 - scaffold_3 No
AL5G05540 aly name=fgenesh1_pg.C_scaffold_5000438;pid=347046;prot=eq;tid=347046 + scaffold_5 No
AL5G05560 aly name=Al_scaffold_0005_526;pid=865047;prot=eq;tid=896560 + scaffold_5 No
AL5G05570 aly name=fgenesh2_kg.5__452__AT3G26840.1;pid=484460;prot=eq;tid=484460 + scaffold_5 No
AL7G36530 aly name=fgenesh2_kg.7__3295__AT5G41130.1;pid=493862;prot=eq;tid=493862 + scaffold_7 No
AL7G36580 aly name=fgenesh2_kg.7__3296__AT5G41120.1;pid=493863;prot=eq;tid=493863 + scaffold_7 No
AT1G54570 ath Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).;Esterase/lipase/thioesterase family protein transcript=eq;prot=eq; - 1 No
AT3G02030 ath transferases, transferring acyl groups other than amino-acyl groups;acyltransferases; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 598 Blast hits to 587 proteins in 168 species: Archae - 0; Bacteria - 374; Metazoa - 27; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).;transferases, transferring acyl groups other than amino-acyl groups;acyltransferases transcript=eq;prot=eq; + 3 No
AT3G26820 ath Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT3G26840.1); Has 441 Blast hits to 434 proteins in 126 species: Archae - 0; Bacteria - 203; Metazoa - 10; Fungi - 4; Plants - 170; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).;Esterase/lipase/thioesterase family protein transcript=eq;prot=eq; + 3 No
AT3G26840 ath Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: plastoglobule; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT3G26820.1); Has 601 Blast hits to 592 proteins in 177 species: Archae - 0; Bacteria - 312; Metazoa - 80; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).;Esterase/lipase/thioesterase family protein transcript=eq;prot=eq; + 3 No
AT5G41120 ath Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Esterase/lipase/thioesterase family protein transcript=eq;prot=eq; - 5 No
AT5G41130 ath Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41120.1).;Esterase/lipase/thioesterase family protein transcript=eq;prot=eq; - 5 No
BD2G12850 bdi pid=Bradi2g12850.1;tid=Bradi2g12850.1;GeneName=Bradi2g12850;transcript=eq;prot=eq + Bd2 No
BD2G12870 bdi acyltransferase activity (Blast2GO) pid=Bradi2g12870.1;tid=Bradi2g12870.1;GeneName=Bradi2g12870;transcript=eq;prot=eq + Bd2 No
BD2G12880 bdi acyltransferase activity (Blast2GO) pid=Bradi2g12880.1;tid=Bradi2g12880.1;GeneName=Bradi2g12880;transcript=eq;prot=eq + Bd2 No
BD4G34846 bdi pid=Bradi4g34846.1;tid=Bradi4g34846.1;GeneName=Bradi4g34846;transcript=eq;prot=eq - Bd4 No
CP00070G00970 cpa name=evm.TU.supercontig_70.97;pid=evm.TU.supercontig_70.97;prot=eq;transcript=eq + supercontig_70 No
CP00070G00980 cpa name=evm.TU.supercontig_70.98;pid=evm.TU.supercontig_70.98;prot=eq;transcript=eq + supercontig_70 No
CP00070G00990 cpa name=evm.TU.supercontig_70.99;pid=evm.TU.supercontig_70.99;prot=eq;transcript=eq + supercontig_70 No
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