Gene family 
- Id
- HOM000971
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO004282 (27 genes in 19 species)
ORTHO007509 (23 genes in 17 species)
ORTHO007843 (22 genes in 20 species)
View all sub-families (8)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (9 genes)
- ath
- Arabidopsis thaliana (6 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (4 genes)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (4 genes)
- gma
- Glycine max (10 genes)
- lja
- Lotus japonicus (6 genes)
- mdo
- Malus domestica (10 genes)
- mes
- Manihot esculenta (7 genes)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (3 genes)
- osa
- Oryza sativa ssp. japonica (4 genes)
- osaindica
- Oryza sativa ssp. indica (4 genes)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (10 genes)
- rco
- Ricinus communis (4 genes)
- sbi
- Sorghum bicolor (5 genes)
- tca
- Theobroma cacao (4 genes)
- vvi
- Vitis vinifera (5 genes)
- zma
- Zea mays (12 genes)
The gene family HOM000971 has 116 genes in 21 species (6 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000971
Page 1 of 6, showing 20 records out of 116 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G10360 | aly | name=scaffold_74600002.1;pid=920940;prot=eq;tid=952453 | - | scaffold_746 | No | |
| AL1G26200 | aly | name=scaffold_102784.1;pid=889990;prot=eq;tid=921503 | + | scaffold_1 | No | |
| AL1G45460 | aly | name=scaffold_104832.1;pid=892038;prot=eq;tid=923551 | - | scaffold_1 | No | |
| AL2G06280 | aly | name=Al_scaffold_0002_568;pid=875974;prot=eq;tid=907487 | + | scaffold_2 | No | |
| AL3G32010 | aly | name=fgenesh1_pm.C_scaffold_3002385;pid=319369;prot=eq;tid=319369 | + | scaffold_3 | No | |
| AL7G07450 | aly | name=scaffold_700782.1;pid=913040;prot=eq;tid=944553 | - | scaffold_7 | No | |
| AL7G08120 | aly | name=scaffold_700853.1;pid=913111;prot=eq;tid=944624 | + | scaffold_7 | No | |
| AL7G14930 | aly | name=scaffold_701581.1;pid=913839;prot=eq;tid=945352 | + | scaffold_7 | No | |
| AL8G28980 | aly | name=Al_scaffold_0008_2772;pid=886508;prot=eq;tid=918021 | + | scaffold_8 | No | |
| AT1G27210 | ath | ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G59850.1); Has 516 Blast hits to 439 proteins in 115 species: Archae - 2; Bacteria - 40; Metazoa - 93; Fungi - 74; Plants - 195; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G50890 | ath | ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27060.1); Has 197 Blast hits to 187 proteins in 35 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 19; Plants - 159; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G59850 | ath | ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 622 Blast hits to 550 proteins in 137 species: Archae - 2; Bacteria - 12; Metazoa - 156; Fungi - 145; Plants - 176; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | - | 1 | No |
| AT2G07170 | ath | ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 437 Blast hits to 391 proteins in 95 species: Archae - 6; Bacteria - 71; Metazoa - 26; Fungi - 88; Plants - 186; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | + | 2 | No |
| AT4G27060 | ath | Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth. The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction.;ARM repeat superfamily protein | transcript=eq;prot=eq; | - | 4 | No |
| AT5G62580 | ath | ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G27210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;ARM repeat superfamily protein | transcript=eq;prot=eq; | + | 5 | No |
| BD1G26090 | bdi | pid=Bradi1g26090.1;tid=Bradi1g26090.1;GeneName=Bradi1g26090;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G44560 | bdi | pid=Bradi1g44560.1;tid=Bradi1g44560.1;GeneName=Bradi1g44560;transcript=eq;prot=eq | - | Bd1 | No | |
| BD3G21540 | bdi | pid=Bradi3g21540.1;tid=Bradi3g21540.1;GeneName=Bradi3g21540;transcript=eq;prot=eq | + | Bd3 | Yes | |
| BD3G59730 | bdi | pid=Bradi3g59730.1;tid=Bradi3g59730.1;GeneName=Bradi3g59730;transcript=eq;prot=eq | + | Bd3 | No | |
| BD4G37910 | bdi | pid=Bradi4g37910.1;tid=Bradi4g37910.1;GeneName=Bradi4g37910;transcript=eq;prot=eq | - | Bd4 | No |