Gene family  

Sub-families
ORTHO001041 (43 genes in 20 species)
ORTHO004325 (27 genes in 22 species)
ORTHO011768 (16 genes in 13 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (7 genes)
ath
Arabidopsis thaliana (8 genes)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (4 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (5 genes)
gma
Glycine max (11 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (17 genes)
mes
Manihot esculenta (6 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (10 genes)
rco
Ricinus communis (5 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (6 genes)
zma
Zea mays (5 genes)



The gene family HOM000921 has 121 genes in 22 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 121 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G01800 aly name=fgenesh2_kg.1__175__AT1G02630.1;pid=470221;prot=eq;tid=470221 - scaffold_1 No
AL2G04130 aly name=fgenesh2_kg.2__294__AT1G61630.1;pid=475164;prot=eq;tid=475164 - scaffold_2 No
AL2G18760 aly name=fgenesh2_kg.2__1286__AT1G70330.1;pid=476156;prot=eq;tid=476156 + scaffold_2 No
AL3G10250 aly name=fgenesh2_kg.3__1027__AT3G09990.1;pid=478326;prot=eq;tid=478326 - scaffold_3 No
AL6G37080 aly name=fgenesh2_kg.6__3295__AT4G05110.1;pid=490161;prot=eq;tid=490161 - scaffold_6 No
AL6G37090 aly name=scaffold_603838.1;pid=911781;prot=eq;tid=943294 - scaffold_6 No
AL6G37100 aly name=scaffold_603839.1;pid=911782;prot=eq;tid=943295 - scaffold_6 No
AT1G02630 ath Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: equilibrative nucleotide transporter 1 (TAIR:AT1G70330.1); Has 1148 Blast hits to 1019 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 540; Fungi - 114; Plants - 205; Viruses - 3; Other Eukaryotes - 286 (source: NCBI BLink).;Nucleoside transporter family protein transcript=eq;prot=eq; - 1 No
AT1G61630 ath equilibrative nucleoside transporter 7 (ENT7); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: petal, leaf whorl, sperm cell, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 936 Blast hits to 904 proteins in 182 species: Archae - 0; Bacteria - 2; Metazoa - 417; Fungi - 105; Plants - 210; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink).;equilibrative nucleoside transporter 7 transcript=eq;prot=eq; + 1 No
AT1G70330 ath encodes an adenosine transporter that catalyze a proton-dependent adenosine transport.;equilibrative nucleotide transporter 1 transcript=eq;prot=eq; + 1 No
AT3G09990 ath Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 921 Blast hits to 872 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 100; Plants - 207; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).;Nucleoside transporter family protein transcript=eq;prot=eq; - 3 No
AT4G05110 ath equilibrative nucleoside transporter 6 (ENT6); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;equilibrative nucleoside transporter 6 transcript=eq;prot=eq; - 4 No
AT4G05120 ath Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.;Major facilitator superfamily protein transcript=eq;prot=eq; - 4 No
AT4G05130 ath equilibrative nucleoside transporter 4 (ENT4); FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 901 Blast hits to 863 proteins in 185 species: Archae - 0; Bacteria - 2; Metazoa - 419; Fungi - 101; Plants - 210; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink).;equilibrative nucleoside transporter 4 transcript=eq;prot=eq; - 4 No
AT4G05140 ath Nucleoside transporter family protein; FUNCTIONS IN: nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G05120.1); Has 856 Blast hits to 813 proteins in 166 species: Archae - 0; Bacteria - 2; Metazoa - 379; Fungi - 84; Plants - 207; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).;Nucleoside transporter family protein transcript=eq;prot=eq; - 4 No
BD1G24960 bdi nucleoside transmembrane transporter activity (Blast2GO) pid=Bradi1g24960.1;tid=Bradi1g24960.1;GeneName=Bradi1g24960;transcript=eq;prot=eq + Bd1 No
BD3G17700 bdi nucleoside transmembrane transporter activity (Blast2GO) pid=Bradi3g17700.1;tid=Bradi3g17700.1;GeneName=Bradi3g17700;transcript=eq;prot=eq - Bd3 No
CP00027G01390 cpa name=evm.TU.supercontig_27.140;pid=evm.TU.supercontig_27.140;prot=eq;transcript=eq - supercontig_27 No
CP00034G00640 cpa name=evm.TU.supercontig_34.64;pid=evm.TU.supercontig_34.64;prot=eq;transcript=eq + supercontig_34 No
CP00046G00120 cpa name=evm.TU.supercontig_46.12;pid=evm.TU.supercontig_46.12;prot=eq;transcript=eq - supercontig_46 No
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