Gene family  

Sub-families
ORTHO000201 (83 genes in 25 species)
ORTHO015059 (11 genes in 1 species)
ORTHO037887 (3 genes in 1 species)
View all sub-families (5)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (10 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (8 genes)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (20 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (5 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (8 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (6 genes)



The gene family HOM000914 has 122 genes in 25 species (18 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 122 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G50490 aly name=fgenesh1_pm.C_scaffold_1003575;pid=314795;prot=eq;tid=314795 + scaffold_1 No
AL5G06030 aly name=scaffold_500637.1;pid=904933;prot=eq;tid=936446 - scaffold_5 No
AL5G06580 aly name=Al_scaffold_0005_621;pid=865142;prot=eq;tid=896655 + scaffold_5 No
AL7G15560 aly name=fgenesh1_pm.C_scaffold_7001259;pid=329032;prot=eq;tid=329032 - scaffold_7 No
AL7G36850 aly name=fgenesh2_kg.7__3323__AT5G40870.1;pid=493890;prot=eq;tid=493890 - scaffold_7 No
AT1G55810 ath One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.;uridine kinase-like 3 transcript=eq;prot=eq; + 1 No
AT3G27190 ath One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.;uridine kinase-like 2 transcript=eq;prot=eq; - 3 No
AT3G27440 ath One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.;uridine kinase-like 5 transcript=eq;prot=eq; + 3 No
AT4G26510 ath One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.;uridine kinase-like 4 transcript=eq;prot=eq; + 4 No
AT5G40870 ath Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities.;uridine kinase/uracil phosphoribosyltransferase 1 transcript=eq;prot=eq; + 5 No
BD3G10140 bdi uridine kinase activity (Blast2GO) pid=Bradi3g10140.1;tid=Bradi3g10140.1;GeneName=Bradi3g10140;transcript=eq;prot=eq + Bd3 No
BD3G41130 bdi uridine kinase activity (Blast2GO) pid=Bradi3g41130.1;tid=Bradi3g41130.1;GeneName=Bradi3g41130;transcript=eq;prot=eq + Bd3 No
BD4G34600 bdi uridine kinase activity (Blast2GO) pid=Bradi4g34600.1;tid=Bradi4g34600.1;GeneName=Bradi4g34600;transcript=eq;prot=eq - Bd4 No
BD4G38030 bdi uridine kinase activity (Blast2GO) pid=Bradi4g38030.1;tid=Bradi4g38030.1;GeneName=Bradi4g38030;transcript=eq;prot=eq + Bd4 No
CP00012G01030 cpa name=evm.TU.supercontig_12.103;pid=evm.TU.supercontig_12.103;prot=eq;transcript=eq + supercontig_12 No
CP00130G00720 cpa name=evm.TU.supercontig_130.72;pid=evm.TU.supercontig_130.72;prot=eq;transcript=eq + supercontig_130 No
CP00701G00020 cpa name=evm.TU.supercontig_701.2;pid=evm.TU.supercontig_701.2;prot=eq;transcript=eq + supercontig_701 No
CR13G02510 cre name=kg.chromosome_13_#_468_#_XP_001693503.1;pid=316323;prot=eq;tid=316330;transcript=eq + chromosome_13 No
CR16G07110 cre name=pasa_Sanger_mRNA14621;pid=396754;prot=eq;tid=404939;transcript=eq + chromosome_16 No
FV0G40140 fve Uridine-cytidine kinase-like 1 (probable) transcript=eq;prot=eq;pid=gene27969 - scf0513124 No
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