Gene family 
- Id
- HOM000884
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO004662 (27 genes in 19 species)
ORTHO007798 (22 genes in 19 species)
ORTHO010997 (18 genes in 17 species)
View all sub-families (13)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (4 genes)
- ath
- Arabidopsis thaliana (4 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (7 genes)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (5 genes)
- gma
- Glycine max (18 genes)
- lja
- Lotus japonicus (5 genes)
- mdo
- Malus domestica (10 genes)
- mes
- Manihot esculenta (6 genes)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (5 genes)
- olu
- Ostreococcus lucimarinus (2 genes)
- osa
- Oryza sativa ssp. japonica (5 genes)
- osaindica
- Oryza sativa ssp. indica (7 genes)
- ota
- Ostreococcus tauri (2 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (12 genes)
- rco
- Ricinus communis (5 genes)
- sbi
- Sorghum bicolor (4 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (5 genes)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (4 genes)
- zma
- Zea mays (5 genes)
The gene family HOM000884 has 125 genes in 25 species (4 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000884
Page 1 of 7, showing 20 records out of 125 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL3G11620 | aly | name=fgenesh2_kg.3__1161__AT3G11210.1;pid=478460;prot=eq;tid=478460 | - | scaffold_3 | No | |
| AL4G24380 | aly | name=scaffold_402518.1;pid=903017;prot=eq;tid=934530 | + | scaffold_4 | No | |
| AL8G02450 | aly | name=fgenesh2_kg.8__203__AT5G45920.1;pid=494387;prot=eq;tid=494387 | - | scaffold_8 | No | |
| AL8G29460 | aly | name=fgenesh2_kg.8__2294__AT5G62930.1;pid=496478;prot=eq;tid=496478 | + | scaffold_8 | No | |
| AT2G38180 | ath | SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT3G11210.1); Has 749 Blast hits to 745 proteins in 289 species: Archae - 0; Bacteria - 287; Metazoa - 79; Fungi - 158; Plants - 167; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).;SGNH hydrolase-type esterase superfamily protein | transcript=eq;prot=eq; | + | 2 | No |
| AT3G11210 | ath | SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).;SGNH hydrolase-type esterase superfamily protein | transcript=eq;prot=eq; | - | 3 | No |
| AT5G45920 | ath | SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G62930.1); Has 723 Blast hits to 722 proteins in 270 species: Archae - 0; Bacteria - 249; Metazoa - 79; Fungi - 169; Plants - 173; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).;SGNH hydrolase-type esterase superfamily protein | transcript=eq;prot=eq; | + | 5 | No |
| AT5G62930 | ath | SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).;SGNH hydrolase-type esterase superfamily protein | transcript=eq;prot=eq; | + | 5 | No |
| BD1G23070 | bdi | pid=Bradi1g23070.1;tid=Bradi1g23070.1;GeneName=Bradi1g23070;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G49020 | bdi | pid=Bradi1g49020.1;tid=Bradi1g49020.1;GeneName=Bradi1g49020;transcript=eq;prot=eq | - | Bd1 | No | |
| BD1G74310 | bdi | pid=Bradi1g74310.1;tid=Bradi1g74310.1;GeneName=Bradi1g74310;transcript=eq;prot=eq | - | Bd1 | No | |
| BD2G06900 | bdi | pid=Bradi2g06900.1;tid=Bradi2g06900.1;GeneName=Bradi2g06900;transcript=eq;prot=eq | - | Bd2 | No | |
| BD2G13430 | bdi | pid=Bradi2g13430.1;tid=Bradi2g13430.1;GeneName=Bradi2g13430;transcript=eq;prot=eq | + | Bd2 | No | |
| CP00007G00390 | cpa | name=evm.TU.supercontig_7.39;pid=evm.TU.supercontig_7.39;prot=eq;transcript=eq | - | supercontig_7 | No | |
| CP00011G01340 | cpa | name=evm.TU.supercontig_11.135;pid=evm.TU.supercontig_11.135;prot=eq;transcript=eq | - | supercontig_11 | No | |
| CP00019G01750 | cpa | name=evm.TU.supercontig_19.176;pid=evm.TU.supercontig_19.176;prot=eq;transcript=eq | - | supercontig_19 | No | |
| CP00076G00370 | cpa | name=evm.TU.supercontig_76.37;pid=evm.TU.supercontig_76.37;prot=eq;transcript=eq | - | supercontig_76 | No | |
| CP00076G00380 | cpa | name=evm.TU.supercontig_76.38;pid=evm.TU.supercontig_76.38;prot=eq;transcript=eq | - | supercontig_76 | No | |
| CP00076G00390 | cpa | name=evm.TU.supercontig_76.39;pid=evm.TU.supercontig_76.39;prot=eq;transcript=eq | - | supercontig_76 | Yes | |
| CP00076G00400 | cpa | name=evm.TU.supercontig_76.40;pid=evm.TU.supercontig_76.40;prot=eq;transcript=eq | - | supercontig_76 | No |