Gene family  

Sub-families
ORTHO002539 (32 genes in 19 species)
ORTHO007780 (22 genes in 17 species)
ORTHO010036 (19 genes in 13 species)
View all sub-families (12)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (5 genes)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (14 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (19 genes)
mes
Manihot esculenta (12 genes)
mtr
Medicago truncatula (5 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ppa
Physcomitrella patens (12 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (12 genes)
sbi
Sorghum bicolor (6 genes)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (6 genes)



The gene family HOM000827 has 132 genes in 19 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 132 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G03540 aly name=fgenesh2_kg.3__357__AT3G03990.1;pid=477656;prot=eq;tid=477656 + scaffold_3 No
AL3G27760 aly name=scaffold_302989.1;pid=899019;prot=eq;tid=930532 - scaffold_3 No
AL7G03170 aly name=scaffold_700333.1;pid=912591;prot=eq;tid=944104 + scaffold_7 No
AT3G03990 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7052 Blast hits to 7050 proteins in 1427 species: Archae - 69; Bacteria - 5615; Metazoa - 94; Fungi - 57; Plants - 279; Viruses - 0; Other Eukaryotes - 938 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 3 No
AT3G24420 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7600 Blast hits to 7598 proteins in 1433 species: Archae - 43; Bacteria - 6108; Metazoa - 134; Fungi - 45; Plants - 270; Viruses - 2; Other Eukaryotes - 998 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 3 No
AT4G37470 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 4 No
BD1G15880 bdi pid=Bradi1g15880.1;tid=Bradi1g15880.1;GeneName=Bradi1g15880;transcript=eq;prot=eq + Bd1 No
BD1G70930 bdi pid=Bradi1g70930.1;tid=Bradi1g70930.1;GeneName=Bradi1g70930;transcript=eq;prot=eq - Bd1 No
BD2G14500 bdi pid=Bradi2g14500.1;tid=Bradi2g14500.1;GeneName=Bradi2g14500;transcript=eq;prot=eq + Bd2 No
BD2G33950 bdi pid=Bradi2g33950.1;tid=Bradi2g33950.1;GeneName=Bradi2g33950;transcript=eq;prot=eq + Bd2 No
BD2G42570 bdi pid=Bradi2g42570.1;tid=Bradi2g42570.1;GeneName=Bradi2g42570;transcript=eq;prot=eq + Bd2 No
CP00006G00580 cpa name=evm.TU.supercontig_6.58;pid=evm.TU.supercontig_6.58;prot=eq;transcript=eq + supercontig_6 No
CP00023G01160 cpa name=evm.TU.supercontig_23.116;pid=evm.TU.supercontig_23.116;prot=eq;transcript=eq + supercontig_23 No
CP00085G00190 cpa name=evm.TU.supercontig_85.19;pid=evm.TU.supercontig_85.19;prot=eq;transcript=eq + supercontig_85 No
CP01323G00030 cpa name=evm.TU.supercontig_1323.3;pid=evm.TU.supercontig_1323.3;prot=eq;transcript=eq - supercontig_1323 No
FV1G00630 fve Sigma factor sigB regulation protein rsbQ (probable) transcript=eq;prot=eq;pid=gene02073 - LG1 No
FV1G17140 fve Sigma factor sigB regulation protein rsbQ (probable) transcript=eq;prot=eq;pid=gene23992 + LG1 No
FV2G31460 fve Sigma factor sigB regulation protein rsbQ (probable) transcript=eq;prot=eq;pid=gene02565 + LG2 No
GM00G00495 gma 92 pid=16242819;transcript=eq;prot=eq;name=Glyma0092s00240.1 - scaffold_92 No
GM01G39850 gma 01 pid=16245759;transcript=eq;prot=eq;name=Glyma01g39850.1 - Gm01 No
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