Gene family 
- Id
- HOM000827
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO002539 (32 genes in 19 species)
ORTHO007780 (22 genes in 17 species)
ORTHO010036 (19 genes in 13 species)
View all sub-families (12)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (3 genes)
- ath
- Arabidopsis thaliana (3 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (4 genes)
- fve
- Fragaria vesca (3 genes)
- gma
- Glycine max (14 genes)
- lja
- Lotus japonicus (3 genes)
- mdo
- Malus domestica (19 genes)
- mes
- Manihot esculenta (12 genes)
- mtr
- Medicago truncatula (5 genes)
- osa
- Oryza sativa ssp. japonica (5 genes)
- osaindica
- Oryza sativa ssp. indica (5 genes)
- ppa
- Physcomitrella patens (12 genes)
- ptr
- Populus trichocarpa (6 genes)
- rco
- Ricinus communis (12 genes)
- sbi
- Sorghum bicolor (6 genes)
- tca
- Theobroma cacao (4 genes)
- vvi
- Vitis vinifera (5 genes)
- zma
- Zea mays (6 genes)
The gene family HOM000827 has 132 genes in 19 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000827
Page 1 of 7, showing 20 records out of 132 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL3G03540 | aly | name=fgenesh2_kg.3__357__AT3G03990.1;pid=477656;prot=eq;tid=477656 | + | scaffold_3 | No | |
| AL3G27760 | aly | name=scaffold_302989.1;pid=899019;prot=eq;tid=930532 | - | scaffold_3 | No | |
| AL7G03170 | aly | name=scaffold_700333.1;pid=912591;prot=eq;tid=944104 | + | scaffold_7 | No | |
| AT3G03990 | ath | alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7052 Blast hits to 7050 proteins in 1427 species: Archae - 69; Bacteria - 5615; Metazoa - 94; Fungi - 57; Plants - 279; Viruses - 0; Other Eukaryotes - 938 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G24420 | ath | alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7600 Blast hits to 7598 proteins in 1433 species: Archae - 43; Bacteria - 6108; Metazoa - 134; Fungi - 45; Plants - 270; Viruses - 2; Other Eukaryotes - 998 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein | transcript=eq;prot=eq; | - | 3 | No |
| AT4G37470 | ath | alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein | transcript=eq;prot=eq; | - | 4 | No |
| BD1G15880 | bdi | pid=Bradi1g15880.1;tid=Bradi1g15880.1;GeneName=Bradi1g15880;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G70930 | bdi | pid=Bradi1g70930.1;tid=Bradi1g70930.1;GeneName=Bradi1g70930;transcript=eq;prot=eq | - | Bd1 | No | |
| BD2G14500 | bdi | pid=Bradi2g14500.1;tid=Bradi2g14500.1;GeneName=Bradi2g14500;transcript=eq;prot=eq | + | Bd2 | No | |
| BD2G33950 | bdi | pid=Bradi2g33950.1;tid=Bradi2g33950.1;GeneName=Bradi2g33950;transcript=eq;prot=eq | + | Bd2 | No | |
| BD2G42570 | bdi | pid=Bradi2g42570.1;tid=Bradi2g42570.1;GeneName=Bradi2g42570;transcript=eq;prot=eq | + | Bd2 | No | |
| CP00006G00580 | cpa | name=evm.TU.supercontig_6.58;pid=evm.TU.supercontig_6.58;prot=eq;transcript=eq | + | supercontig_6 | No | |
| CP00023G01160 | cpa | name=evm.TU.supercontig_23.116;pid=evm.TU.supercontig_23.116;prot=eq;transcript=eq | + | supercontig_23 | No | |
| CP00085G00190 | cpa | name=evm.TU.supercontig_85.19;pid=evm.TU.supercontig_85.19;prot=eq;transcript=eq | + | supercontig_85 | No | |
| CP01323G00030 | cpa | name=evm.TU.supercontig_1323.3;pid=evm.TU.supercontig_1323.3;prot=eq;transcript=eq | - | supercontig_1323 | No | |
| FV1G00630 | fve | Sigma factor sigB regulation protein rsbQ (probable) | transcript=eq;prot=eq;pid=gene02073 | - | LG1 | No |
| FV1G17140 | fve | Sigma factor sigB regulation protein rsbQ (probable) | transcript=eq;prot=eq;pid=gene23992 | + | LG1 | No |
| FV2G31460 | fve | Sigma factor sigB regulation protein rsbQ (probable) | transcript=eq;prot=eq;pid=gene02565 | + | LG2 | No |
| GM00G00495 | gma | 92 | pid=16242819;transcript=eq;prot=eq;name=Glyma0092s00240.1 | - | scaffold_92 | No |
| GM01G39850 | gma | 01 | pid=16245759;transcript=eq;prot=eq;name=Glyma01g39850.1 | - | Gm01 | No |