Gene family  

Sub-families
ORTHO000128 (100 genes in 20 species)
ORTHO030808 (4 genes in 1 species)
ORTHO040450 (3 genes in 1 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (16 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (16 genes)
mes
Manihot esculenta (7 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ppa
Physcomitrella patens (7 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (5 genes)
smo
Selaginella moellendorffii (17 genes)
tca
Theobroma cacao (4 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (5 genes)



The gene family HOM000823 has 132 genes in 20 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 132 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G10150 aly name=Al_scaffold_0705_1;pid=887186;prot=eq;tid=918699 + scaffold_705 No
AL2G26650 aly name=fgenesh2_kg.2__2063__AT1G77690.1;pid=476933;prot=eq;tid=476933 - scaffold_2 No
AL4G00140 aly name=scaffold_400014.1;pid=900513;prot=eq;tid=932026 + scaffold_4 No
AL4G24310 aly name=fgenesh2_kg.4__1879__AT2G38120.1;pid=482819;prot=eq;tid=482819 + scaffold_4 No
AL4G26690 aly name=fgenesh1_pg.C_scaffold_4002130;pid=345788;prot=eq;tid=345788 + scaffold_4 No
AL6G00880 aly name=fgenesh2_kg.6__87__AT5G01240.1;pid=486953;prot=eq;tid=486953 - scaffold_6 No
AT1G77690 ath Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.;like AUX1 3 transcript=eq;prot=eq; - 1 No
AT2G21050 ath Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.;like AUXIN RESISTANT 2 transcript=eq;prot=eq; + 2 No
AT2G38120 ath Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.;Transmembrane amino acid transporter family protein transcript=eq;prot=eq; + 2 No
AT5G01240 ath Encodes LAX1 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.;like AUXIN RESISTANT 1 transcript=eq;prot=eq; + 5 No
BD1G68350 bdi Aux/LAX- Like Auxin Importer, syntenic to Sb01g041270, Os03g14080 pid=Bradi1g68350.1;tid=Bradi1g68350.1;GeneName=Bradi1g68350;transcript=eq;prot=eq + Bd1 No
BD2G55340 bdi Aux/LAX- Like Auxin Importer, syntenic to Sb03g040320, Os01g63770 pid=Bradi2g55340.1;tid=Bradi2g55340.1;GeneName=Bradi2g55340;transcript=eq;prot=eq + Bd2 No
BD3G21090 bdi Aux/LAX- Like Auxin Importer, syntenic to Sb01g026240, Os10g05690.1 pid=Bradi3g21090.1;tid=Bradi3g21090.1;GeneName=Bradi3g21090;transcript=eq;prot=eq - Bd3 No
CP00019G02060 cpa name=evm.TU.supercontig_19.207;pid=evm.TU.supercontig_19.207;prot=eq;transcript=eq + supercontig_19 No
CP00036G00170 cpa name=evm.TU.supercontig_36.17;pid=evm.TU.supercontig_36.17;prot=eq;transcript=eq + supercontig_36 No
CP00037G01630 cpa name=evm.TU.supercontig_37.163;pid=evm.TU.supercontig_37.163;prot=eq;transcript=eq + supercontig_37 No
CP01125G00010 cpa name=evm.TU.supercontig_1125.1;pid=evm.TU.supercontig_1125.1;prot=eq;transcript=eq + supercontig_1125 No
FV2G07020 fve Auxin transporter-like protein 2 (putative) transcript=eq;prot=eq;pid=gene07619 - LG2 No
FV2G28820 fve Auxin transporter-like protein 3 (putative) transcript=eq;prot=eq;pid=gene11123 + LG2 No
FV6G10860 fve Auxin transporter-like protein 2 (putative) transcript=eq;prot=eq;pid=gene18832 - LG6 No
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