Gene family 
- Id
- HOM000760
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO002591 (31 genes in 23 species)
ORTHO002606 (31 genes in 19 species)
ORTHO009736 (20 genes in 14 species)
View all sub-families (9)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (3 genes)
- ath
- Arabidopsis thaliana (3 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (5 genes)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (7 genes)
- gma
- Glycine max (12 genes)
- lja
- Lotus japonicus (4 genes)
- mdo
- Malus domestica (11 genes)
- mes
- Manihot esculenta (9 genes)
- mrcc299
- Micromonas sp. RCC299 (2 genes)
- mtr
- Medicago truncatula (2 genes)
- olu
- Ostreococcus lucimarinus (1 gene)
- osa
- Oryza sativa ssp. japonica (6 genes)
- osaindica
- Oryza sativa ssp. indica (7 genes)
- ota
- Ostreococcus tauri (1 gene)
- ppa
- Physcomitrella patens (13 genes)
- ptr
- Populus trichocarpa (9 genes)
- rco
- Ricinus communis (6 genes)
- sbi
- Sorghum bicolor (8 genes)
- smo
- Selaginella moellendorffii (7 genes)
- tca
- Theobroma cacao (6 genes)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (5 genes)
- zma
- Zea mays (9 genes)
The gene family HOM000760 has 143 genes in 25 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000760
Page 1 of 8, showing 20 records out of 143 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G01050 | aly | name=fgenesh1_pm.C_scaffold_9000057;pid=333029;prot=eq;tid=333029 | - | scaffold_9 | No | |
| AL1G08170 | aly | name=scaffold_100878.1;pid=888084;prot=eq;tid=919597 | - | scaffold_1 | No | |
| AL3G28670 | aly | name=fgenesh2_kg.3__2717__AT3G25110.1;pid=480016;prot=eq;tid=480016 | - | scaffold_3 | No | |
| AT1G08510 | ath | Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.;fatty acyl-ACP thioesterases B | transcript=eq;prot=eq; | - | 1 | No |
| AT3G25110 | ath | Encodes a FatA acyl-ACP thioesterase;fatA acyl-ACP thioesterase | transcript=eq;prot=eq; | - | 3 | No |
| AT4G13050 | ath | Acyl-ACP thioesterase; FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1268 Blast hits to 1268 proteins in 529 species: Archae - 0; Bacteria - 942; Metazoa - 0; Fungi - 0; Plants - 319; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).;Acyl-ACP thioesterase | transcript=eq;prot=eq; | + | 4 | No |
| BD1G36950 | bdi | pid=Bradi1g36950.1;tid=Bradi1g36950.1;GeneName=Bradi1g36950;transcript=eq;prot=eq | - | Bd1 | No | |
| BD1G51170 | bdi | pid=Bradi1g51170.1;tid=Bradi1g51170.1;GeneName=Bradi1g51170;transcript=eq;prot=eq | + | Bd1 | No | |
| BD2G13720 | bdi | pid=Bradi2g13720.1;tid=Bradi2g13720.1;GeneName=Bradi2g13720;transcript=eq;prot=eq | - | Bd2 | No | |
| BD4G03210 | bdi | pid=Bradi4g03210.1;tid=Bradi4g03210.1;GeneName=Bradi4g03210;transcript=eq;prot=eq | + | Bd4 | No | |
| BD4G34500 | bdi | pid=Bradi4g34500.1;tid=Bradi4g34500.1;GeneName=Bradi4g34500;transcript=eq;prot=eq | - | Bd4 | No | |
| CP00004G01570 | cpa | name=evm.TU.supercontig_4.157;pid=evm.TU.supercontig_4.157;prot=eq;transcript=eq | + | supercontig_4 | No | |
| CP00004G01580 | cpa | name=evm.TU.supercontig_4.158;pid=evm.TU.supercontig_4.158;prot=eq;transcript=eq | + | supercontig_4 | No | |
| CP00065G00870 | cpa | name=evm.TU.supercontig_65.87;pid=evm.TU.supercontig_65.87;prot=eq;transcript=eq | - | supercontig_65 | No | |
| CP00428G00020 | cpa | name=evm.TU.supercontig_428.2;pid=evm.TU.supercontig_428.2;prot=eq;transcript=eq | - | supercontig_428 | No | |
| CP03897G00010 | cpa | name=evm.TU.supercontig_3897.1;pid=evm.TU.supercontig_3897.1;prot=eq;transcript=eq | + | supercontig_3897 | No | |
| CR06G01720 | cre | name=FER_159672;pid=196283;prot=eq;tid=196283;transcript=eq | + | chromosome_6 | No | |
| FV0G00650 | fve | Myristoyl-acyl carrier protein thioesterase, chloroplastic (16:0-ACP thioesterase), Precursor (probable) | transcript=eq;prot=eq;pid=gene03641 | + | scf0513158 | No |
| FV0G00730 | fve | Myristoyl-acyl carrier protein thioesterase, chloroplastic (16:0-ACP thioesterase), Precursor (similar to) | transcript=eq;prot=eq;pid=gene03649 | + | scf0513158 | No |
| FV0G09690 | fve | Myristoyl-acyl carrier protein thioesterase, chloroplastic (16:0-ACP thioesterase), Precursor (similar to) | transcript=eq;prot=eq;pid=gene06289 | + | scf0513158 | No |