Gene family  

Sub-families
ORTHO002591 (31 genes in 23 species)
ORTHO002606 (31 genes in 19 species)
ORTHO009736 (20 genes in 14 species)
View all sub-families (9)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (5 genes)
cpa
Carica papaya (5 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (7 genes)
gma
Glycine max (12 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (11 genes)
mes
Manihot esculenta (9 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (6 genes)
osaindica
Oryza sativa ssp. indica (7 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (13 genes)
ptr
Populus trichocarpa (9 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (8 genes)
smo
Selaginella moellendorffii (7 genes)
tca
Theobroma cacao (6 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (9 genes)



The gene family HOM000760 has 143 genes in 25 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 143 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G01050 aly name=fgenesh1_pm.C_scaffold_9000057;pid=333029;prot=eq;tid=333029 - scaffold_9 No
AL1G08170 aly name=scaffold_100878.1;pid=888084;prot=eq;tid=919597 - scaffold_1 No
AL3G28670 aly name=fgenesh2_kg.3__2717__AT3G25110.1;pid=480016;prot=eq;tid=480016 - scaffold_3 No
AT1G08510 ath Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.;fatty acyl-ACP thioesterases B transcript=eq;prot=eq; - 1 No
AT3G25110 ath Encodes a FatA acyl-ACP thioesterase;fatA acyl-ACP thioesterase transcript=eq;prot=eq; - 3 No
AT4G13050 ath Acyl-ACP thioesterase; FUNCTIONS IN: acyl carrier activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1268 Blast hits to 1268 proteins in 529 species: Archae - 0; Bacteria - 942; Metazoa - 0; Fungi - 0; Plants - 319; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).;Acyl-ACP thioesterase transcript=eq;prot=eq; + 4 No
BD1G36950 bdi pid=Bradi1g36950.1;tid=Bradi1g36950.1;GeneName=Bradi1g36950;transcript=eq;prot=eq - Bd1 No
BD1G51170 bdi pid=Bradi1g51170.1;tid=Bradi1g51170.1;GeneName=Bradi1g51170;transcript=eq;prot=eq + Bd1 No
BD2G13720 bdi pid=Bradi2g13720.1;tid=Bradi2g13720.1;GeneName=Bradi2g13720;transcript=eq;prot=eq - Bd2 No
BD4G03210 bdi pid=Bradi4g03210.1;tid=Bradi4g03210.1;GeneName=Bradi4g03210;transcript=eq;prot=eq + Bd4 No
BD4G34500 bdi pid=Bradi4g34500.1;tid=Bradi4g34500.1;GeneName=Bradi4g34500;transcript=eq;prot=eq - Bd4 No
CP00004G01570 cpa name=evm.TU.supercontig_4.157;pid=evm.TU.supercontig_4.157;prot=eq;transcript=eq + supercontig_4 No
CP00004G01580 cpa name=evm.TU.supercontig_4.158;pid=evm.TU.supercontig_4.158;prot=eq;transcript=eq + supercontig_4 No
CP00065G00870 cpa name=evm.TU.supercontig_65.87;pid=evm.TU.supercontig_65.87;prot=eq;transcript=eq - supercontig_65 No
CP00428G00020 cpa name=evm.TU.supercontig_428.2;pid=evm.TU.supercontig_428.2;prot=eq;transcript=eq - supercontig_428 No
CP03897G00010 cpa name=evm.TU.supercontig_3897.1;pid=evm.TU.supercontig_3897.1;prot=eq;transcript=eq + supercontig_3897 No
CR06G01720 cre name=FER_159672;pid=196283;prot=eq;tid=196283;transcript=eq + chromosome_6 No
FV0G00650 fve Myristoyl-acyl carrier protein thioesterase, chloroplastic (16:0-ACP thioesterase), Precursor (probable) transcript=eq;prot=eq;pid=gene03641 + scf0513158 No
FV0G00730 fve Myristoyl-acyl carrier protein thioesterase, chloroplastic (16:0-ACP thioesterase), Precursor (similar to) transcript=eq;prot=eq;pid=gene03649 + scf0513158 No
FV0G09690 fve Myristoyl-acyl carrier protein thioesterase, chloroplastic (16:0-ACP thioesterase), Precursor (similar to) transcript=eq;prot=eq;pid=gene06289 + scf0513158 No
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