Gene family  

Sub-families
ORTHO000923 (44 genes in 19 species)
ORTHO001954 (34 genes in 21 species)
ORTHO004308 (27 genes in 22 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (9 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (9 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (4 genes)
gma
Glycine max (5 genes)
lja
Lotus japonicus (31 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (3 genes)
mtr
Medicago truncatula (7 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (17 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (5 genes)
sbi
Sorghum bicolor (5 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (6 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (12 genes)



The gene family HOM000739 has 146 genes in 23 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 146 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G32150 aly name=Al_scaffold_0001_3175;pid=881408;prot=eq;tid=912921 + scaffold_1 No
AL1G32160 aly name=fgenesh2_kg.1__3275__ATCG00810.1;pid=473321;prot=eq;tid=473321 + scaffold_1 No
AL1G32170 aly name=fgenesh2_kg.1__3276__ATCG00800.1;pid=473322;prot=eq;tid=473322 + scaffold_1 No
AL2G09880 aly name=Al_scaffold_0002_935;pid=876341;prot=eq;tid=907854 + scaffold_2 No
AL2G09890 aly name=fgenesh1_pm.C_scaffold_2000530;pid=315497;prot=eq;tid=315497 + scaffold_2 No
AL2G09900 aly name=fgenesh2_kg.2__679__ATCG00800.1;pid=475549;prot=eq;tid=475549 + scaffold_2 No
AL2G10980 aly name=fgenesh2_kg.2__747__ATCG00800.1;pid=475617;prot=eq;tid=475617 - scaffold_2 No
AL2G10990 aly name=fgenesh1_pm.C_scaffold_2000596;pid=315563;prot=eq;tid=315563 - scaffold_2 No
AL5G09580 aly name=scaffold_500992.1;pid=905288;prot=eq;tid=936801 + scaffold_5 No
ATCG00800 ath encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex;structural constituent of ribosome transcript=eq;prot=eq; - chloroplast No
ATCG00810 ath encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex;ribosomal protein L22 transcript=eq;prot=eq; - chloroplast No
ATCG00820 ath Encodes a 6.8-kDa protein of the small ribosomal subunit.;ribosomal protein S19 transcript=eq;prot=eq; - chloroplast No
BD1G01690 bdi pid=Bradi1g01690.1;tid=Bradi1g01690.1;GeneName=Bradi1g01690;transcript=eq;prot=eq - Bd1 Yes
BD1G05803 bdi pid=Bradi1g05803.1;tid=Bradi1g05803.1;GeneName=Bradi1g05803;transcript=eq;prot=eq + Bd1 No
BD1G71472 bdi pid=Bradi1g71472.1;tid=Bradi1g71472.1;GeneName=Bradi1g71472;transcript=eq;prot=eq + Bd1 No
BD3G18422 bdi pid=Bradi3g18422.1;tid=Bradi3g18422.1;GeneName=Bradi3g18422;transcript=eq;prot=eq - Bd3 No
BD5G10962 bdi pid=Bradi5g10962.1;tid=Bradi5g10962.1;GeneName=Bradi5g10962;transcript=eq;prot=eq + Bd5 No
BDCG00780 bdi rps3;ribosomal protein S3;protein_id=ACF08676.1; transl_table=11; - chloroplast No
BDCG00790 bdi rpl22;ribosomal protein L22;protein_id=ACF08677.1; transl_table=11; - chloroplast No
BDCG00800 bdi rps19;ribosomal protein S19;protein_id=ACF08678.1; transl_table=11; - chloroplast No
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