Gene family 
- Id
- HOM000720
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO011129 (18 genes in 8 species)
ORTHO015936 (9 genes in 5 species)
ORTHO015982 (9 genes in 5 species)
View all sub-families (29)
- Keywords
-
Overview of gene family content
- bdi
- Brachypodium distachyon (24 genes)
- fve
- Fragaria vesca (2 genes)
- gma
- Glycine max (3 genes)
- mdo
- Malus domestica (3 genes)
- mes
- Manihot esculenta (2 genes)
- osa
- Oryza sativa ssp. japonica (27 genes)
- osaindica
- Oryza sativa ssp. indica (32 genes)
- ptr
- Populus trichocarpa (11 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (20 genes)
- tca
- Theobroma cacao (9 genes)
- vvi
- Vitis vinifera (3 genes)
- zma
- Zea mays (12 genes)
The gene family HOM000720 has 149 genes in 13 species (6 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : HOM000720
Page 1 of 8, showing 20 records out of 149 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
BD1G43260 | bdi | pid=Bradi1g43260.1;tid=Bradi1g43260.1;GeneName=Bradi1g43260;transcript=eq;prot=eq | - | Bd1 | No | |
BD1G43270 | bdi | pid=Bradi1g43270.1;tid=Bradi1g43270.1;GeneName=Bradi1g43270;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G43280 | bdi | pid=Bradi1g43280.1;tid=Bradi1g43280.1;GeneName=Bradi1g43280;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G43300 | bdi | pid=Bradi1g43300.1;tid=Bradi1g43300.1;GeneName=Bradi1g43300;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G43310 | bdi | pid=Bradi1g43310.1;tid=Bradi1g43310.1;GeneName=Bradi1g43310;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G43320 | bdi | pid=Bradi1g43320.1;tid=Bradi1g43320.1;GeneName=Bradi1g43320;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G43330 | bdi | pid=Bradi1g43330.1;tid=Bradi1g43330.1;GeneName=Bradi1g43330;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G43530 | bdi | pid=Bradi1g43530.1;tid=Bradi1g43530.1;GeneName=Bradi1g43530;transcript=eq;prot=eq | - | Bd1 | No | |
BD1G44600 | bdi | pid=Bradi1g44600.1;tid=Bradi1g44600.1;GeneName=Bradi1g44600;transcript=eq;prot=eq | + | Bd1 | No | |
BD2G50780 | bdi | pid=Bradi2g50780.1;tid=Bradi2g50780.1;GeneName=Bradi2g50780;transcript=eq;prot=eq | - | Bd2 | No | |
BD3G16060 | bdi | pid=Bradi3g16060.1;tid=Bradi3g16060.1;GeneName=Bradi3g16060;transcript=eq;prot=eq | - | Bd3 | No | |
BD3G16070 | bdi | pid=Bradi3g16070.1;tid=Bradi3g16070.1;GeneName=Bradi3g16070;transcript=eq;prot=eq | - | Bd3 | No | |
BD3G16080 | bdi | pid=Bradi3g16080.1;tid=Bradi3g16080.1;GeneName=Bradi3g16080;transcript=eq;prot=eq | + | Bd3 | No | |
BD3G55600 | bdi | pid=Bradi3g55600.1;tid=Bradi3g55600.1;GeneName=Bradi3g55600;transcript=eq;prot=eq | - | Bd3 | No | |
BD4G04340 | bdi | pid=Bradi4g04340.1;tid=Bradi4g04340.1;GeneName=Bradi4g04340;transcript=eq;prot=eq | - | Bd4 | No | |
BD4G10350 | bdi | pid=Bradi4g10350.1;tid=Bradi4g10350.1;GeneName=Bradi4g10350;transcript=eq;prot=eq | + | Bd4 | No | |
BD4G43050 | bdi | pid=Bradi4g43050.1;tid=Bradi4g43050.1;GeneName=Bradi4g43050;transcript=eq;prot=eq | - | Bd4 | No | |
BD4G43350 | bdi | pid=Bradi4g43350.1;tid=Bradi4g43350.1;GeneName=Bradi4g43350;transcript=eq;prot=eq | + | Bd4 | Yes | |
BD4G43357 | bdi | pid=Bradi4g43357.1;tid=Bradi4g43357.1;GeneName=Bradi4g43357;transcript=eq;prot=eq | + | Bd4 | No | |
BD4G43540 | bdi | pid=Bradi4g43540.1;tid=Bradi4g43540.1;GeneName=Bradi4g43540;transcript=eq;prot=eq | - | Bd4 | No |