Gene family  

Sub-families
ORTHO000296 (70 genes in 19 species)
ORTHO005271 (26 genes in 21 species)
ORTHO017578 (7 genes in 5 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (6 genes)
ath
Arabidopsis thaliana (10 genes)
bdi
Brachypodium distachyon (7 genes)
cpa
Carica papaya (4 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (8 genes)
mdo
Malus domestica (8 genes)
mes
Manihot esculenta (6 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (12 genes)
osaindica
Oryza sativa ssp. indica (14 genes)
ppa
Physcomitrella patens (6 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (11 genes)
sbi
Sorghum bicolor (11 genes)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (6 genes)
vca
Volvox carteri (3 genes)
vvi
Vitis vinifera (6 genes)
zma
Zea mays (11 genes)



The gene family HOM000717 has 149 genes in 23 species (11 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 149 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G03990 aly name=fgenesh2_kg.1__394__AT1G04580.1;pid=470440;prot=eq;tid=470440 - scaffold_1 No
AL4G10800 aly name=fgenesh2_kg.4__663__AT2G27150.1;pid=481603;prot=eq;tid=481603 + scaffold_4 No
AL5G11110 aly name=fgenesh1_pm.C_scaffold_5000636;pid=323092;prot=eq;tid=323092 - scaffold_5 No
AL6G21260 aly name=fgenesh2_kg.6__2141__AT5G20960.2;pid=489007;prot=eq;tid=489007 + scaffold_6 No
AL6G39230 aly name=scaffold_604061.1;pid=912004;prot=eq;tid=943517 - scaffold_6 No
AL7G06050 aly name=fgenesh2_kg.7__598__AT4G34890.1;pid=491165;prot=eq;tid=491165 - scaffold_7 No
AT1G02590 ath Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein; FUNCTIONS IN: oxidoreductase activity, aldehyde oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 4 (TAIR:AT1G04580.1); Has 1946 Blast hits to 1943 proteins in 514 species: Archae - 0; Bacteria - 697; Metazoa - 537; Fungi - 88; Plants - 177; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink).;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein transcript=eq;prot=eq; - 1 No
AT1G04580 ath Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.;aldehyde oxidase 4 transcript=eq;prot=eq; - 1 No
AT2G27150 ath Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.;abscisic aldehyde oxidase 3 transcript=eq;prot=eq; + 2 No
AT3G04390 ath Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein; FUNCTIONS IN: oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 1158 Blast hits to 1158 proteins in 355 species: Archae - 0; Bacteria - 373; Metazoa - 343; Fungi - 90; Plants - 43; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink).;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein transcript=eq;prot=eq; - 3 Yes
AT3G43600 ath Encodes an aldehyde oxidase. AAO2 does not appear to act on abscisic aldehyde in vitro but it is possible that it may function in abscisic acid biosynthesis when the activity of At2g27150 (AAO3), the primary abscisic aldehyde oxidase, is lost.;aldehyde oxidase 2 transcript=eq;prot=eq; - 3 No
AT4G31196 ath oxidoreductases; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein (TAIR:AT3G04390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;oxidoreductases transcript=eq;prot=eq; + 4 Yes
AT4G34890 ath Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.;xanthine dehydrogenase 1 transcript=eq;prot=eq; - 4 No
AT4G34900 ath xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink).;xanthine dehydrogenase 2 transcript=eq;prot=eq; - 4 No
AT4G37500 ath Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein; FUNCTIONS IN: oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 1927 Blast hits to 1927 proteins in 522 species: Archae - 1; Bacteria - 723; Metazoa - 556; Fungi - 90; Plants - 54; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink).;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein transcript=eq;prot=eq; + 4 Yes
AT5G20960 ath Encodes aldehyde oxidase AA01.;aldehyde oxidase 1 transcript=eq;prot=eq; + 5 No
BD1G06160 bdi ATP binding (Blast2GO) pid=Bradi1g06160.1;tid=Bradi1g06160.1;GeneName=Bradi1g06160;transcript=eq;prot=eq - Bd1 No
BD1G06170 bdi pid=Bradi1g06170.1;tid=Bradi1g06170.1;GeneName=Bradi1g06170;transcript=eq;prot=eq - Bd1 No
BD1G06177 bdi pid=Bradi1g06177.1;tid=Bradi1g06177.1;GeneName=Bradi1g06177;transcript=eq;prot=eq - Bd1 No
BD1G06200 bdi ATP binding (Blast2GO) pid=Bradi1g06200.1;tid=Bradi1g06200.1;GeneName=Bradi1g06200;transcript=eq;prot=eq + Bd1 No
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