Gene family  

Sub-families
ORTHO002281 (33 genes in 24 species)
ORTHO004134 (28 genes in 24 species)
ORTHO007286 (23 genes in 21 species)
View all sub-families (11)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (6 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (9 genes)
gma
Glycine max (7 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (17 genes)
mes
Manihot esculenta (3 genes)
mrcc299
Micromonas sp. RCC299 (3 genes)
mtr
Medicago truncatula (12 genes)
olu
Ostreococcus lucimarinus (3 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (22 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (7 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (5 genes)
vca
Volvox carteri (5 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (5 genes)



The gene family HOM000709 has 151 genes in 25 species (5 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 151 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G28150 aly name=fgenesh2_kg.5__2208__AT3G57660.1;pid=486216;prot=eq;tid=486216 + scaffold_5 No
AL7G04990 aly name=fgenesh2_kg.7__493__AT4G35800.1;pid=491060;prot=eq;tid=491060 + scaffold_7 No
AL8G26240 aly name=fgenesh2_kg.8__1958__AT5G60040.1;pid=496142;prot=eq;tid=496142 + scaffold_8 No
AT3G57660 ath Encodes a subunit of RNA polymerase I (aka RNA polymerase A).;nuclear RNA polymerase A1 transcript=eq;prot=eq; + 3 No
AT4G35800 ath Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.;RNA polymerase II large subunit transcript=eq;prot=eq; - 4 No
AT5G60040 ath Encodes a subunit of RNA polymerase III (aka RNA polymerase C).;nuclear RNA polymerase C1 transcript=eq;prot=eq; + 5 No
BD1G00350 bdi DNA-directed RNA polymerase activity (Blast2GO) pid=Bradi1g00350.1;tid=Bradi1g00350.1;GeneName=Bradi1g00350;transcript=eq;prot=eq + Bd1 No
BD1G00360 bdi DNA-directed RNA polymerase activity (Blast2GO) pid=Bradi1g00360.1;tid=Bradi1g00360.1;GeneName=Bradi1g00360;transcript=eq;prot=eq + Bd1 No
BD1G02620 bdi DNA-directed RNA polymerase activity (Blast2GO) pid=Bradi1g02620.1;tid=Bradi1g02620.1;GeneName=Bradi1g02620;transcript=eq;prot=eq + Bd1 No
BD3G00507 bdi pid=Bradi3g00507.1;tid=Bradi3g00507.1;GeneName=Bradi3g00507;transcript=eq;prot=eq - Bd3 No
BD3G16660 bdi DNA-directed RNA polymerase activity, ATP binding (Blast2GO) pid=Bradi3g16660.1;tid=Bradi3g16660.1;GeneName=Bradi3g16660;transcript=eq;prot=eq + Bd3 No
BD3G43050 bdi DNA-directed RNA polymerase activity (Blast2GO) pid=Bradi3g43050.1;tid=Bradi3g43050.1;GeneName=Bradi3g43050;transcript=eq;prot=eq - Bd3 No
CP00006G03090 cpa name=evm.TU.supercontig_6.310;pid=evm.TU.supercontig_6.310;prot=eq;transcript=eq + supercontig_6 No
CP00007G02070 cpa name=evm.TU.supercontig_7.207;pid=evm.TU.supercontig_7.207;prot=eq;transcript=eq - supercontig_7 No
CP00007G02090 cpa name=evm.TU.supercontig_7.209;pid=evm.TU.supercontig_7.209;prot=eq;transcript=eq - supercontig_7 No
CP00092G00050 cpa name=evm.TU.supercontig_92.5;pid=evm.TU.supercontig_92.5;prot=eq;transcript=eq - supercontig_92 No
CP00092G00060 cpa name=evm.TU.supercontig_92.6;pid=evm.TU.supercontig_92.6;prot=eq;transcript=eq - supercontig_92 No
CP00092G00070 cpa name=evm.TU.supercontig_92.7;pid=evm.TU.supercontig_92.7;prot=eq;transcript=eq - supercontig_92 No
CR03G03730 cre name=au.g10467_t1;pid=292592;prot=eq;tid=292599;transcript=eq - chromosome_3 No
CR12G09660 cre name=fgenesh2_pg.C_scaffold_31000007;pid=176094;prot=eq;tid=176094;transcript=eq - chromosome_12 No
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