Gene family  

Sub-families
ORTHO001506 (38 genes in 17 species)
ORTHO008988 (21 genes in 16 species)
ORTHO008992 (21 genes in 14 species)
View all sub-families (10)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (6 genes)
bdi
Brachypodium distachyon (8 genes)
cpa
Carica papaya (6 genes)
fve
Fragaria vesca (8 genes)
gma
Glycine max (16 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (14 genes)
mes
Manihot esculenta (10 genes)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (7 genes)
osaindica
Oryza sativa ssp. indica (11 genes)
ptr
Populus trichocarpa (14 genes)
rco
Ricinus communis (8 genes)
sbi
Sorghum bicolor (11 genes)
tca
Theobroma cacao (8 genes)
vvi
Vitis vinifera (8 genes)
zma
Zea mays (13 genes)



The gene family HOM000673 has 157 genes in 17 species (7 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 157 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT2G26190 ath calmodulin-binding family protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT4G33050.3); Has 368 Blast hits to 279 proteins in 59 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 105; Plants - 232; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;calmodulin-binding family protein transcript=eq;prot=eq; - 2 No
AT3G13600 ath calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink).;calmodulin-binding family protein transcript=eq;prot=eq; + 3 No
AT3G52870 ath IQ calmodulin-binding motif family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 341 Blast hits to 277 proteins in 58 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 100; Plants - 209; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;IQ calmodulin-binding motif family protein transcript=eq;prot=eq; - 3 No
AT3G58480 ath calmodulin-binding family protein; BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G13600.1); Has 404 Blast hits to 327 proteins in 76 species: Archae - 0; Bacteria - 22; Metazoa - 8; Fungi - 105; Plants - 225; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).;calmodulin-binding family protein transcript=eq;prot=eq; + 3 No
AT4G33050 ath embryo sac development arrest 39 (EDA39); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT2G26190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;calmodulin-binding family protein transcript=eq;prot=eq; - 4 No
AT5G57010 ath calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT4G33050.3); Has 390 Blast hits to 271 proteins in 57 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 100; Plants - 264; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;calmodulin-binding family protein transcript=eq;prot=eq; + 5 No
BD1G15080 bdi pid=Bradi1g15080.1;tid=Bradi1g15080.1;GeneName=Bradi1g15080;transcript=eq;prot=eq + Bd1 Yes
BD1G20350 bdi pid=Bradi1g20350.1;tid=Bradi1g20350.1;GeneName=Bradi1g20350;transcript=eq;prot=eq - Bd1 No
BD1G61340 bdi pid=Bradi1g61340.1;tid=Bradi1g61340.1;GeneName=Bradi1g61340;transcript=eq;prot=eq + Bd1 No
BD1G73900 bdi pid=Bradi1g73900.1;tid=Bradi1g73900.1;GeneName=Bradi1g73900;transcript=eq;prot=eq + Bd1 No
BD2G33150 bdi pid=Bradi2g33150.1;tid=Bradi2g33150.1;GeneName=Bradi2g33150;transcript=eq;prot=eq + Bd2 No
BD2G41490 bdi pid=Bradi2g41490.1;tid=Bradi2g41490.1;GeneName=Bradi2g41490;transcript=eq;prot=eq - Bd2 No
BD3G26370 bdi pid=Bradi3g26370.1;tid=Bradi3g26370.1;GeneName=Bradi3g26370;transcript=eq;prot=eq + Bd3 No
BD4G42560 bdi pid=Bradi4g42560.1;tid=Bradi4g42560.1;GeneName=Bradi4g42560;transcript=eq;prot=eq - Bd4 No
CP00025G00730 cpa name=evm.TU.supercontig_25.73;pid=evm.TU.supercontig_25.73;prot=eq;transcript=eq - supercontig_25 No
CP00028G01280 cpa name=evm.TU.supercontig_28.128;pid=evm.TU.supercontig_28.128;prot=eq;transcript=eq - supercontig_28 No
CP00085G00120 cpa name=evm.TU.supercontig_85.12;pid=evm.TU.supercontig_85.12;prot=eq;transcript=eq - supercontig_85 No
CP00085G00130 cpa name=evm.TU.supercontig_85.13;pid=evm.TU.supercontig_85.13;prot=eq;transcript=eq - supercontig_85 No
CP00119G00590 cpa name=evm.TU.supercontig_119.59;pid=evm.TU.supercontig_119.59;prot=eq;transcript=eq - supercontig_119 No
CP47076G00010 cpa name=evm.TU.contig_47076.1;pid=evm.TU.contig_47076.1;prot=eq;transcript=eq + contig_47076 No
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