Gene family 
- Id
- HOM000666
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO001129 (41 genes in 16 species)
ORTHO024916 (5 genes in 3 species)
ORTHO034098 (3 genes in 3 species)
View all sub-families (7)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (8 genes)
- ath
- Arabidopsis thaliana (2 genes)
- cpa
- Carica papaya (7 genes)
- fve
- Fragaria vesca (6 genes)
- gma
- Glycine max (4 genes)
- lja
- Lotus japonicus (49 genes)
- mdo
- Malus domestica (13 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (23 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (9 genes)
- rco
- Ricinus communis (21 genes)
- sbi
- Sorghum bicolor (1 gene)
- tca
- Theobroma cacao (6 genes)
- vvi
- Vitis vinifera (5 genes)
- zma
- Zea mays (2 genes)
The gene family HOM000666 has 158 genes in 16 species (7 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000666
Page 1 of 8, showing 20 records out of 158 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G01770 | aly | name=fgenesh1_pm.C_scaffold_9000105;pid=333077;prot=eq;tid=333077 | - | scaffold_9 | No | |
| AL1G32120 | aly | name=Al_scaffold_0001_3172;pid=881405;prot=eq;tid=912918 | - | scaffold_1 | No | |
| AL1G38270 | aly | name=scaffold_104087.1;pid=891293;prot=eq;tid=922806 | - | scaffold_1 | No | |
| AL2G09850 | aly | name=scaffold_201001.1;pid=893927;prot=eq;tid=925440 | - | scaffold_2 | No | |
| AL2G11020 | aly | name=fgenesh2_kg.2__754__ATCG00860.1;pid=475624;prot=eq;tid=475624 | + | scaffold_2 | No | |
| AL4G13470 | aly | name=scaffold_401356.1;pid=901855;prot=eq;tid=933368 | - | scaffold_4 | No | |
| AL5G00820 | aly | name=scaffold_500089.1;pid=904385;prot=eq;tid=935898 | + | scaffold_5 | No | |
| AL7G32250 | aly | name=fgenesh1_pm.C_scaffold_7002401;pid=330174;prot=eq;tid=330174 | + | scaffold_7 | No | |
| ATCG00860 | ath | Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally.;Chloroplast Ycf2;ATPase, AAA type, core | transcript=eq;prot=eq; | + | chloroplast | No |
| ATCG01280 | ath | hypothetical protein;Chloroplast Ycf2;ATPase, AAA type, core | transcript=eq;prot=eq; | - | chloroplast | No |
| CP00010G02250 | cpa | name=evm.TU.supercontig_10.225;pid=evm.TU.supercontig_10.225;prot=eq;transcript=eq | - | supercontig_10 | No | |
| CP00030G00640 | cpa | name=evm.TU.supercontig_30.64;pid=evm.TU.supercontig_30.64;prot=eq;transcript=eq | + | supercontig_30 | No | |
| CP00068G00070 | cpa | name=evm.TU.supercontig_68.7;pid=evm.TU.supercontig_68.7;prot=eq;transcript=eq | - | supercontig_68 | Yes | |
| CP03885G00010 | cpa | name=evm.TU.supercontig_3885.1;pid=evm.TU.supercontig_3885.1;prot=eq;transcript=eq | - | supercontig_3885 | No | |
| CP42550G00030 | cpa | name=evm.TU.contig_42550.3;pid=evm.TU.contig_42550.3;prot=eq;transcript=eq | + | contig_42550 | No | |
| CPCG00870 | cpa | ycf2;Ycf2;protein_id=ABY86826.1; | transl_table=11; | + | chloroplast | No |
| CPCG01250 | cpa | ycf2;Ycf2;protein_id=ABY86843.1; | transl_table=11; | - | chloroplast | No |
| FV0G53760 | fve | Protein ycf2 (similar to) | transcript=eq;prot=eq;pid=gene32764 | - | scf0510712 | No |
| FV0G53910 | fve | Protein ycf2 (similar to) | transcript=eq;prot=eq;pid=gene32759 | - | scf0510701 | No |
| FV0G58200 | fve | Protein ycf2 (similar to) | transcript=eq;prot=eq;pid=gene32816 | + | scf0510910 | Yes |