Gene family  

Sub-families
ORTHO001129 (41 genes in 16 species)
ORTHO024916 (5 genes in 3 species)
ORTHO034098 (3 genes in 3 species)
View all sub-families (7)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (8 genes)
ath
Arabidopsis thaliana (2 genes)
cpa
Carica papaya (7 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (4 genes)
lja
Lotus japonicus (49 genes)
mdo
Malus domestica (13 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (23 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (9 genes)
rco
Ricinus communis (21 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (6 genes)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (2 genes)



The gene family HOM000666 has 158 genes in 16 species (7 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 158 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G01770 aly name=fgenesh1_pm.C_scaffold_9000105;pid=333077;prot=eq;tid=333077 - scaffold_9 No
AL1G32120 aly name=Al_scaffold_0001_3172;pid=881405;prot=eq;tid=912918 - scaffold_1 No
AL1G38270 aly name=scaffold_104087.1;pid=891293;prot=eq;tid=922806 - scaffold_1 No
AL2G09850 aly name=scaffold_201001.1;pid=893927;prot=eq;tid=925440 - scaffold_2 No
AL2G11020 aly name=fgenesh2_kg.2__754__ATCG00860.1;pid=475624;prot=eq;tid=475624 + scaffold_2 No
AL4G13470 aly name=scaffold_401356.1;pid=901855;prot=eq;tid=933368 - scaffold_4 No
AL5G00820 aly name=scaffold_500089.1;pid=904385;prot=eq;tid=935898 + scaffold_5 No
AL7G32250 aly name=fgenesh1_pm.C_scaffold_7002401;pid=330174;prot=eq;tid=330174 + scaffold_7 No
ATCG00860 ath Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally.;Chloroplast Ycf2;ATPase, AAA type, core transcript=eq;prot=eq; + chloroplast No
ATCG01280 ath hypothetical protein;Chloroplast Ycf2;ATPase, AAA type, core transcript=eq;prot=eq; - chloroplast No
CP00010G02250 cpa name=evm.TU.supercontig_10.225;pid=evm.TU.supercontig_10.225;prot=eq;transcript=eq - supercontig_10 No
CP00030G00640 cpa name=evm.TU.supercontig_30.64;pid=evm.TU.supercontig_30.64;prot=eq;transcript=eq + supercontig_30 No
CP00068G00070 cpa name=evm.TU.supercontig_68.7;pid=evm.TU.supercontig_68.7;prot=eq;transcript=eq - supercontig_68 Yes
CP03885G00010 cpa name=evm.TU.supercontig_3885.1;pid=evm.TU.supercontig_3885.1;prot=eq;transcript=eq - supercontig_3885 No
CP42550G00030 cpa name=evm.TU.contig_42550.3;pid=evm.TU.contig_42550.3;prot=eq;transcript=eq + contig_42550 No
CPCG00870 cpa ycf2;Ycf2;protein_id=ABY86826.1; transl_table=11; + chloroplast No
CPCG01250 cpa ycf2;Ycf2;protein_id=ABY86843.1; transl_table=11; - chloroplast No
FV0G53760 fve Protein ycf2 (similar to) transcript=eq;prot=eq;pid=gene32764 - scf0510712 No
FV0G53910 fve Protein ycf2 (similar to) transcript=eq;prot=eq;pid=gene32759 - scf0510701 No
FV0G58200 fve Protein ycf2 (similar to) transcript=eq;prot=eq;pid=gene32816 + scf0510910 Yes
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outlier