Gene family  

Sub-families
ORTHO001235 (40 genes in 23 species)
ORTHO002247 (33 genes in 17 species)
ORTHO017470 (7 genes in 2 species)
View all sub-families (16)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (12 genes)
ath
Arabidopsis thaliana (16 genes)
bdi
Brachypodium distachyon (9 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (7 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (6 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (3 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (10 genes)
osaindica
Oryza sativa ssp. indica (9 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (5 genes)
sbi
Sorghum bicolor (13 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (4 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (12 genes)
zma
Zea mays (8 genes)



The gene family HOM000653 has 159 genes in 25 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 8, showing 20 records out of 159 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G12500 aly name=Al_scaffold_0001_1231;pid=879464;prot=eq;tid=910977 + scaffold_1 No
AL1G12510 aly name=fgenesh1_pg.C_scaffold_1001072;pid=334507;prot=eq;tid=334507 + scaffold_1 No
AL1G12530 aly name=fgenesh2_kg.1__1320__AT1G12160.1;pid=471366;prot=eq;tid=471366 + scaffold_1 No
AL1G12570 aly name=scaffold_101335.1;pid=888541;prot=eq;tid=920054 + scaffold_1 No
AL2G02870 aly name=fgenesh2_kg.2__216__AT1G62620.1;pid=475086;prot=eq;tid=475086 - scaffold_2 No
AL2G02890 aly name=fgenesh2_kg.2__218__AT1G62600.1;pid=475088;prot=eq;tid=475088 - scaffold_2 No
AL2G02900 aly name=fgenesh2_kg.2__221__AT1G62580.1;pid=475091;prot=eq;tid=475091 - scaffold_2 No
AL2G02910 aly name=scaffold_200299.1;pid=893225;prot=eq;tid=924738 - scaffold_2 No
AL2G02920 aly name=fgenesh2_kg.2__222__AT1G62560.1;pid=475092;prot=eq;tid=475092 - scaffold_2 No
AL2G02930 aly name=fgenesh1_pm.C_scaffold_2000176;pid=315143;prot=eq;tid=315143 - scaffold_2 No
AL6G07500 aly name=fgenesh1_pm.C_scaffold_6000609;pid=325389;prot=eq;tid=325389 - scaffold_6 No
AL8G27480 aly name=fgenesh2_kg.8__2101__AT5G61290.1;pid=496285;prot=eq;tid=496285 + scaffold_8 No
AT1G12130 ath Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G12160.1); Has 14567 Blast hits to 13953 proteins in 1841 species: Archae - 71; Bacteria - 7478; Metazoa - 1324; Fungi - 1597; Plants - 844; Viruses - 0; Other Eukaryotes - 3253 (source: NCBI BLink).;Flavin-binding monooxygenase family protein transcript=eq;prot=eq; + 1 No
AT1G12140 ath belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates;flavin-monooxygenase glucosinolate S-oxygenase 5 transcript=eq;prot=eq; + 1 No
AT1G12160 ath Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G12130.1); Has 8661 Blast hits to 8102 proteins in 1035 species: Archae - 4; Bacteria - 3767; Metazoa - 1139; Fungi - 1126; Plants - 753; Viruses - 0; Other Eukaryotes - 1872 (source: NCBI BLink).;Flavin-binding monooxygenase family protein transcript=eq;prot=eq; + 1 No
AT1G12200 ath Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G62580.1); Has 13440 Blast hits to 12864 proteins in 1673 species: Archae - 50; Bacteria - 7104; Metazoa - 1242; Fungi - 1614; Plants - 842; Viruses - 0; Other Eukaryotes - 2588 (source: NCBI BLink).;Flavin-binding monooxygenase family protein transcript=eq;prot=eq; + 1 No
AT1G62540 ath belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates;flavin-monooxygenase glucosinolate S-oxygenase 2 transcript=eq;prot=eq; + 1 No
AT1G62560 ath belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates;flavin-monooxygenase glucosinolate S-oxygenase 3 transcript=eq;prot=eq; + 1 No
AT1G62570 ath belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates;flavin-monooxygenase glucosinolate S-oxygenase 4 transcript=eq;prot=eq; + 1 No
AT1G62580 ath Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-containing monooxygenase family protein (TAIR:AT1G63340.1); Has 12102 Blast hits to 11779 proteins in 1619 species: Archae - 69; Bacteria - 6462; Metazoa - 1123; Fungi - 1131; Plants - 751; Viruses - 0; Other Eukaryotes - 2566 (source: NCBI BLink).;Flavin-binding monooxygenase family protein transcript=eq;prot=eq; + 1 No
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