Gene family  

Sub-families
ORTHO002407 (32 genes in 22 species)
ORTHO002969 (30 genes in 21 species)
ORTHO004311 (27 genes in 17 species)
View all sub-families (6)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (10 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (6 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (7 genes)
lja
Lotus japonicus (15 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (6 genes)
mrcc299
Micromonas sp. RCC299 (3 genes)
mtr
Medicago truncatula (17 genes)
osa
Oryza sativa ssp. japonica (13 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (16 genes)
rco
Ricinus communis (7 genes)
sbi
Sorghum bicolor (12 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (6 genes)
vvi
Vitis vinifera (8 genes)
zma
Zea mays (5 genes)



The gene family HOM000619 has 164 genes in 23 species (7 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 164 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G10210 aly name=Al_scaffold_0002_964;pid=876370;prot=eq;tid=907883 - scaffold_2 No
AL2G10220 aly name=fgenesh2_kg.2__702__ATCG00280.1;pid=475572;prot=eq;tid=475572 - scaffold_2 No
AL2G10230 aly name=fgenesh1_pm.C_scaffold_2000556;pid=315523;prot=eq;tid=315523 - scaffold_2 No
AL2G10620 aly name=fgenesh2_kg.2__723__ATCG00270.1;pid=475593;prot=eq;tid=475593 + scaffold_2 No
AL2G10630 aly name=fgenesh1_pm.C_scaffold_2000578;pid=315545;prot=eq;tid=315545 + scaffold_2 No
AL2G10640 aly name=scaffold_201093.1;pid=894019;prot=eq;tid=925532 + scaffold_2 No
AL2G14970 aly name=scaffold_201513.1;pid=894439;prot=eq;tid=925952 + scaffold_2 No
AL2G14980 aly name=scaffold_201514.1;pid=894440;prot=eq;tid=925953 + scaffold_2 No
AL2G14990 aly name=Al_scaffold_0002_1342;pid=876748;prot=eq;tid=908261 + scaffold_2 No
AL7G29600 aly name=scaffold_703136.1;pid=915394;prot=eq;tid=946907 + scaffold_7 No
ATCG00270 ath PSII D2 protein;photosystem II reaction center protein D transcript=eq;prot=eq; + chloroplast No
ATCG00280 ath chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element.;photosystem II reaction center protein C transcript=eq;prot=eq; + chloroplast No
ATCG00300 ath encodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II.;YCF9 transcript=eq;prot=eq; + chloroplast No
BD1G56030 bdi pid=Bradi1g56030.1;tid=Bradi1g56030.1;GeneName=Bradi1g56030;transcript=eq;prot=eq - Bd1 No
BD1G78076 bdi pid=Bradi1g78076.1;tid=Bradi1g78076.1;GeneName=Bradi1g78076;transcript=eq;prot=eq + Bd1 No
BD1G78082 bdi pid=Bradi1g78082.1;tid=Bradi1g78082.1;GeneName=Bradi1g78082;transcript=eq;prot=eq + Bd1 No
BDCG00100 bdi psbD;PSII D2 protein;protein_id=ACF08626.1; transl_table=11; + chloroplast No
BDCG00110 bdi psbC;PSII 43kDa protein;protein_id=ACF08627.1; transl_table=11; + chloroplast No
BDCG00130 bdi ycf9;Ycf9;protein_id=ACF08628.1; transl_table=11; + chloroplast No
CP00028G01000 cpa name=evm.TU.supercontig_28.100;pid=evm.TU.supercontig_28.100;prot=eq;transcript=eq - supercontig_28 No
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