Gene family  

Sub-families
ORTHO002208 (33 genes in 21 species)
ORTHO004739 (27 genes in 17 species)
ORTHO005338 (26 genes in 18 species)
View all sub-families (15)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (7 genes)
cpa
Carica papaya (5 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (4 genes)
gma
Glycine max (19 genes)
lja
Lotus japonicus (10 genes)
mdo
Malus domestica (15 genes)
mes
Manihot esculenta (9 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (8 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (12 genes)
osaindica
Oryza sativa ssp. indica (13 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (5 genes)
sbi
Sorghum bicolor (9 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (6 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (10 genes)



The gene family HOM000605 has 167 genes in 25 species (8 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 167 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G19410 aly name=fgenesh2_kg.1__2023__AT1G18490.1;pid=472069;prot=eq;tid=472069 + scaffold_1 No
AL4G30050 aly name=scaffold_403140.1;pid=903639;prot=eq;tid=935152 - scaffold_4 No
AL5G29250 aly name=fgenesh2_kg.5__2312__AT3G58670.1;pid=486320;prot=eq;tid=486320 - scaffold_5 No
AL6G14940 aly name=fgenesh2_kg.6__1487__AT5G15120.1;pid=488353;prot=eq;tid=488353 + scaffold_6 No
AL7G38240 aly name=Al_scaffold_0007_3714;pid=860215;prot=eq;tid=891728 - scaffold_7 No
AT1G18490 ath Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 360 Blast hits to 360 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).;Protein of unknown function (DUF1637) transcript=eq;prot=eq; + 1 No
AT2G42670 ath Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT3G58670.3); Has 366 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).;Protein of unknown function (DUF1637) transcript=eq;prot=eq; - 2 No
AT3G58670 ath Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT2G42670.1); Has 361 Blast hits to 361 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).;Protein of unknown function (DUF1637) transcript=eq;prot=eq; - 3 No
AT5G15120 ath Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 363 Blast hits to 363 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).;Protein of unknown function (DUF1637) transcript=eq;prot=eq; + 5 No
AT5G39890 ath Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).;Protein of unknown function (DUF1637) transcript=eq;prot=eq; + 5 No
BD1G13400 bdi pid=Bradi1g13400.1;tid=Bradi1g13400.1;GeneName=Bradi1g13400;transcript=eq;prot=eq + Bd1 No
BD1G13410 bdi pid=Bradi1g13410.1;tid=Bradi1g13410.1;GeneName=Bradi1g13410;transcript=eq;prot=eq + Bd1 No
BD2G14450 bdi pid=Bradi2g14450.1;tid=Bradi2g14450.1;GeneName=Bradi2g14450;transcript=eq;prot=eq + Bd2 No
BD2G42090 bdi pid=Bradi2g42090.1;tid=Bradi2g42090.1;GeneName=Bradi2g42090;transcript=eq;prot=eq - Bd2 No
BD4G01230 bdi pid=Bradi4g01230.1;tid=Bradi4g01230.1;GeneName=Bradi4g01230;transcript=eq;prot=eq + Bd4 No
BD4G11670 bdi pid=Bradi4g11670.1;tid=Bradi4g11670.1;GeneName=Bradi4g11670;transcript=eq;prot=eq + Bd4 No
BD5G25480 bdi pid=Bradi5g25480.1;tid=Bradi5g25480.1;GeneName=Bradi5g25480;transcript=eq;prot=eq - Bd5 No
CP00013G00810 cpa name=evm.TU.supercontig_13.81;pid=evm.TU.supercontig_13.81;prot=eq;transcript=eq - supercontig_13 No
CP00014G00330 cpa name=evm.TU.supercontig_14.33;pid=evm.TU.supercontig_14.33;prot=eq;transcript=eq - supercontig_14 No
CP00036G01640 cpa name=evm.TU.supercontig_36.164;pid=evm.TU.supercontig_36.164;prot=eq;transcript=eq - supercontig_36 No
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