Gene family  

Sub-families
ORTHO010871 (18 genes in 16 species)
ORTHO012376 (15 genes in 12 species)
ORTHO013024 (14 genes in 12 species)
View all sub-families (24)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (9 genes)
ath
Arabidopsis thaliana (11 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (6 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (9 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (20 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (7 genes)
osa
Oryza sativa ssp. japonica (10 genes)
osaindica
Oryza sativa ssp. indica (12 genes)
ppa
Physcomitrella patens (7 genes)
ptr
Populus trichocarpa (9 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (11 genes)
smo
Selaginella moellendorffii (4 genes)
tca
Theobroma cacao (8 genes)
vvi
Vitis vinifera (9 genes)
zma
Zea mays (8 genes)



The gene family HOM000598 has 168 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 168 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G07960 aly name=Al_scaffold_0001_789;pid=879022;prot=eq;tid=910535 + scaffold_1 No
AL2G23200 aly name=Al_scaffold_0002_2131;pid=877537;prot=eq;tid=909050 + scaffold_2 No
AL3G02520 aly name=fgenesh2_kg.3__270__AT3G03230.1;pid=477569;prot=eq;tid=477569 - scaffold_3 No
AL3G02530 aly name=fgenesh2_kg.3__271__AT3G03240.1;pid=477570;prot=eq;tid=477570 - scaffold_3 No
AL4G21680 aly name=fgenesh2_kg.4__1660__AT2G36290.1;pid=482600;prot=eq;tid=482600 - scaffold_4 No
AL5G12190 aly name=fgenesh2_kg.5__855__AT3G44510.1;pid=484863;prot=eq;tid=484863 - scaffold_5 No
AL5G17260 aly name=fgenesh2_kg.5__1192__AT3G48410.1;pid=485200;prot=eq;tid=485200 - scaffold_5 No
AL5G24300 aly name=fgenesh2_kg.5__1813__AT3G54240.1;pid=485821;prot=eq;tid=485821 + scaffold_5 No
AL6G22120 aly name=fgenesh1_pg.C_scaffold_6001862;pid=351269;prot=eq;tid=351269 - scaffold_6 No
AT1G08310 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G44510.2); Has 1176 Blast hits to 1175 proteins in 318 species: Archae - 2; Bacteria - 667; Metazoa - 58; Fungi - 41; Plants - 314; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
AT1G74280 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74290.1); Has 883 Blast hits to 882 proteins in 201 species: Archae - 12; Bacteria - 418; Metazoa - 2; Fungi - 68; Plants - 310; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
AT1G74290 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 668 Blast hits to 667 proteins in 139 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 56; Plants - 310; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
AT1G74300 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
AT2G36290 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 2 No
AT3G03230 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03240.1); Has 719 Blast hits to 717 proteins in 169 species: Archae - 4; Bacteria - 355; Metazoa - 0; Fungi - 30; Plants - 304; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 3 No
AT3G03240 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, carpel; EXPRESSED DURING: 4 anthesis, C globular stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03230.1); Has 714 Blast hits to 712 proteins in 165 species: Archae - 4; Bacteria - 327; Metazoa - 0; Fungi - 44; Plants - 306; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 3 No
AT3G44510 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G08310.1).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 3 No
AT3G48410 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 1039 Blast hits to 1035 proteins in 267 species: Archae - 10; Bacteria - 561; Metazoa - 10; Fungi - 51; Plants - 319; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 3 No
AT3G54240 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 1283 Blast hits to 1282 proteins in 323 species: Archae - 16; Bacteria - 778; Metazoa - 2; Fungi - 48; Plants - 315; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 3 No
AT5G22460 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 866 Blast hits to 864 proteins in 211 species: Archae - 4; Bacteria - 450; Metazoa - 1; Fungi - 48; Plants - 314; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 5 No
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