Gene family 
- Id
- HOM000597
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO002333 (33 genes in 1 species)
ORTHO005431 (26 genes in 1 species)
ORTHO014535 (12 genes in 1 species)
View all sub-families (16)
- Keywords
-
Overview of gene family content
- lja
- Lotus japonicus (12 genes)
- mes
- Manihot esculenta (1 gene)
- mtr
- Medicago truncatula (1 gene)
- ptr
- Populus trichocarpa (6 genes)
- rco
- Ricinus communis (2 genes)
- tca
- Theobroma cacao (146 genes)
The gene family HOM000597 has 168 genes in 6 species (26 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000597
Page 1 of 9, showing 20 records out of 168 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| LJ0G028270 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_013700;name=LjSGA_013700.1 | + | LjSGA_013700 | No | |
| LJ0G126740 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_039790;name=LjSGA_039790.2 | - | LjSGA_039790 | Yes | |
| LJ0G130520 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_040884;name=LjSGA_040884.1 | + | LjSGA_040884 | No | |
| LJ0G236160 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_077597;name=LjSGA_077597.2 | + | LjSGA_077597 | No | |
| LJ0G275790 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_093285;name=LjSGA_093285.1 | + | LjSGA_093285 | No | |
| LJ0G282740 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_096237;name=LjSGA_096237.1 | + | LjSGA_096237 | No | |
| LJ0G291570 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_100026;name=LjSGA_100026.1 | - | LjSGA_100026 | No | |
| LJ0G376680 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_136399;name=LjSGA_136399.2 | - | LjSGA_136399 | Yes | |
| LJ0G403010 | lja | prot=eq;transcript=eq;scaffold=LjSGA_148821;name=LjSGA_148821.1 | + | LjSGA_148821 | Yes | |
| LJ0G438030 | lja | prot=eq;transcript=eq;scaffold=LjT37G19;name=LjT37G19.100.nc | + | chr0 | No | |
| LJ2G039520 | lja | prot=eq;transcript=eq;scaffold=CM0191;name=chr2.CM0191.330.nc | + | chr2 | No | |
| LJ5G012940 | lja | partial;prot=eq;transcript=eq;scaffold=CM1125;name=chr5.CM1125.190.nc | + | chr5 | No | |
| ME08302G00090 | mes | PACid=17969468;RNAname=cassava4.1_029774m;GeneName=cassava4.1_029774m.g;transcript=eq;prot=eq | - | scaffold08302 | Yes | |
| MT7G026410 | mtr | Unknown Protein (AHRD V1) | transcript=eq;prot=eq;pid=Medtr7g026410.1; | + | 7 | Yes |
| PT00G14910 | ptr | PACid=17334219;name=POPTR_0022s00910;alias=pt002340m; | transcript=eq;prot=eq;protein_id=17334219; | - | scaffold_22 | No |
| PT00G20830 | ptr | PACid=17305938;name=POPTR_0254s00220;alias=pt002512m,eugene3.79660001; | transcript=eq;prot=eq;protein_id=17305938; | - | scaffold_254 | No |
| PT01G05720 | ptr | PACid=17339426;name=POPTR_0001s05910;alias=pt042330m; | transcript=eq;prot=eq;protein_id=17339426; | - | scaffold_1 | No |
| PT06G02680 | ptr | PACid=17338220;name=POPTR_0006s02870;alias=pt019130m; | transcript=eq;prot=eq;protein_id=17338220; | + | scaffold_6 | No |
| PT06G22910 | ptr | PACid=17549088;name=POPTR_0006s24620;alias=pta000342m; | transcript=eq;prot=eq;protein_id=17549088; | - | scaffold_6 | Yes |
| PT12G00600 | ptr | PACid=17306402;name=POPTR_0012s00790;alias=pt016318m,fgenesh4_pg.C_LG_XII000320; | transcript=eq;prot=eq;protein_id=17306402; | - | scaffold_12 | No |