Gene family 
- Id
- HOM000588
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000570 (54 genes in 22 species)
ORTHO008565 (21 genes in 17 species)
ORTHO012709 (15 genes in 10 species)
View all sub-families (12)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (4 genes)
- ath
- Arabidopsis thaliana (4 genes)
- bdi
- Brachypodium distachyon (9 genes)
- cpa
- Carica papaya (3 genes)
- cre
- Chlamydomonas reinhardtii (2 genes)
- fve
- Fragaria vesca (6 genes)
- gma
- Glycine max (13 genes)
- lja
- Lotus japonicus (10 genes)
- mdo
- Malus domestica (16 genes)
- mes
- Manihot esculenta (11 genes)
- mtr
- Medicago truncatula (6 genes)
- osa
- Oryza sativa ssp. japonica (9 genes)
- osaindica
- Oryza sativa ssp. indica (11 genes)
- ppa
- Physcomitrella patens (5 genes)
- ptr
- Populus trichocarpa (8 genes)
- rco
- Ricinus communis (8 genes)
- sbi
- Sorghum bicolor (7 genes)
- smo
- Selaginella moellendorffii (5 genes)
- tca
- Theobroma cacao (13 genes)
- vca
- Volvox carteri (2 genes)
- vvi
- Vitis vinifera (8 genes)
- zma
- Zea mays (10 genes)
The gene family HOM000588 has 170 genes in 22 species (6 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000588
Page 1 of 9, showing 20 records out of 170 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
AL3G35380 | aly | name=fgenesh2_kg.3__3127__AT2G15730.1;pid=480426;prot=eq;tid=480426 | + | scaffold_3 | No | |
AL5G20110 | aly | name=fgenesh2_kg.5__1400__AT3G50620.1;pid=485408;prot=eq;tid=485408 | - | scaffold_5 | No | |
AL7G06530 | aly | name=scaffold_700690.1;pid=912948;prot=eq;tid=944461 | - | scaffold_7 | No | |
AL7G08130 | aly | name=fgenesh2_kg.7__811__AT4G33090.1;pid=491378;prot=eq;tid=491378 | + | scaffold_7 | No | |
AT2G15730 | ath | P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein | transcript=eq;prot=eq; | + | 2 | No |
AT3G50620 | ath | P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G15730.1); Has 170 Blast hits to 170 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein | transcript=eq;prot=eq; | - | 3 | No |
AT4G33090 | ath | encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).;aminopeptidase M1 | transcript=eq;prot=eq; | - | 4 | No |
AT4G34420 | ath | P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G15730.1); Has 209 Blast hits to 205 proteins in 19 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein | transcript=eq;prot=eq; | + | 4 | No |
BD1G19695 | bdi | pid=Bradi1g19695.1;tid=Bradi1g19695.1;GeneName=Bradi1g19695;transcript=eq;prot=eq | - | Bd1 | No | |
BD1G32670 | bdi | pid=Bradi1g32670.1;tid=Bradi1g32670.1;GeneName=Bradi1g32670;transcript=eq;prot=eq | - | Bd1 | No | |
BD1G60550 | bdi | pid=Bradi1g60550.1;tid=Bradi1g60550.1;GeneName=Bradi1g60550;transcript=eq;prot=eq | + | Bd1 | No | |
BD1G61700 | bdi | pid=Bradi1g61700.1;tid=Bradi1g61700.1;GeneName=Bradi1g61700;transcript=eq;prot=eq | + | Bd1 | No | |
BD2G51957 | bdi | pid=Bradi2g51957.1;tid=Bradi2g51957.1;GeneName=Bradi2g51957;transcript=eq;prot=eq | + | Bd2 | No | |
BD3G08120 | bdi | angiotensin receptor activity, metalloaminopeptidase activity (Blast2GO) | pid=Bradi3g08120.1;tid=Bradi3g08120.1;GeneName=Bradi3g08120;transcript=eq;prot=eq | + | Bd3 | No |
BD3G35350 | bdi | angiotensin receptor activity, metalloaminopeptidase activity (Blast2GO) | pid=Bradi3g35350.1;tid=Bradi3g35350.1;GeneName=Bradi3g35350;transcript=eq;prot=eq | - | Bd3 | No |
BD4G28760 | bdi | angiotensin receptor activity, metalloaminopeptidase activity (Blast2GO) | pid=Bradi4g28760.1;tid=Bradi4g28760.1;GeneName=Bradi4g28760;transcript=eq;prot=eq | + | Bd4 | No |
BD4G28767 | bdi | pid=Bradi4g28767.1;tid=Bradi4g28767.1;GeneName=Bradi4g28767;transcript=eq;prot=eq | + | Bd4 | No | |
CP00007G01490 | cpa | name=evm.TU.supercontig_7.149;pid=evm.TU.supercontig_7.149;prot=eq;transcript=eq | + | supercontig_7 | No | |
CP00055G01730 | cpa | name=evm.TU.supercontig_55.173;pid=evm.TU.supercontig_55.173;prot=eq;transcript=eq | + | supercontig_55 | No | |
CP00062G00330 | cpa | name=evm.TU.supercontig_62.33;pid=evm.TU.supercontig_62.33;prot=eq;transcript=eq | + | supercontig_62 | No |