Gene family  

Sub-families
ORTHO000570 (54 genes in 22 species)
ORTHO008565 (21 genes in 17 species)
ORTHO012709 (15 genes in 10 species)
View all sub-families (12)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (9 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (13 genes)
lja
Lotus japonicus (10 genes)
mdo
Malus domestica (16 genes)
mes
Manihot esculenta (11 genes)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (9 genes)
osaindica
Oryza sativa ssp. indica (11 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (8 genes)
sbi
Sorghum bicolor (7 genes)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (13 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (8 genes)
zma
Zea mays (10 genes)



The gene family HOM000588 has 170 genes in 22 species (6 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 170 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G35380 aly name=fgenesh2_kg.3__3127__AT2G15730.1;pid=480426;prot=eq;tid=480426 + scaffold_3 No
AL5G20110 aly name=fgenesh2_kg.5__1400__AT3G50620.1;pid=485408;prot=eq;tid=485408 - scaffold_5 No
AL7G06530 aly name=scaffold_700690.1;pid=912948;prot=eq;tid=944461 - scaffold_7 No
AL7G08130 aly name=fgenesh2_kg.7__811__AT4G33090.1;pid=491378;prot=eq;tid=491378 + scaffold_7 No
AT2G15730 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; + 2 No
AT3G50620 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G15730.1); Has 170 Blast hits to 170 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; - 3 No
AT4G33090 ath encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).;aminopeptidase M1 transcript=eq;prot=eq; - 4 No
AT4G34420 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G15730.1); Has 209 Blast hits to 205 proteins in 19 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; + 4 No
BD1G19695 bdi pid=Bradi1g19695.1;tid=Bradi1g19695.1;GeneName=Bradi1g19695;transcript=eq;prot=eq - Bd1 No
BD1G32670 bdi pid=Bradi1g32670.1;tid=Bradi1g32670.1;GeneName=Bradi1g32670;transcript=eq;prot=eq - Bd1 No
BD1G60550 bdi pid=Bradi1g60550.1;tid=Bradi1g60550.1;GeneName=Bradi1g60550;transcript=eq;prot=eq + Bd1 No
BD1G61700 bdi pid=Bradi1g61700.1;tid=Bradi1g61700.1;GeneName=Bradi1g61700;transcript=eq;prot=eq + Bd1 No
BD2G51957 bdi pid=Bradi2g51957.1;tid=Bradi2g51957.1;GeneName=Bradi2g51957;transcript=eq;prot=eq + Bd2 No
BD3G08120 bdi angiotensin receptor activity, metalloaminopeptidase activity (Blast2GO) pid=Bradi3g08120.1;tid=Bradi3g08120.1;GeneName=Bradi3g08120;transcript=eq;prot=eq + Bd3 No
BD3G35350 bdi angiotensin receptor activity, metalloaminopeptidase activity (Blast2GO) pid=Bradi3g35350.1;tid=Bradi3g35350.1;GeneName=Bradi3g35350;transcript=eq;prot=eq - Bd3 No
BD4G28760 bdi angiotensin receptor activity, metalloaminopeptidase activity (Blast2GO) pid=Bradi4g28760.1;tid=Bradi4g28760.1;GeneName=Bradi4g28760;transcript=eq;prot=eq + Bd4 No
BD4G28767 bdi pid=Bradi4g28767.1;tid=Bradi4g28767.1;GeneName=Bradi4g28767;transcript=eq;prot=eq + Bd4 No
CP00007G01490 cpa name=evm.TU.supercontig_7.149;pid=evm.TU.supercontig_7.149;prot=eq;transcript=eq + supercontig_7 No
CP00055G01730 cpa name=evm.TU.supercontig_55.173;pid=evm.TU.supercontig_55.173;prot=eq;transcript=eq + supercontig_55 No
CP00062G00330 cpa name=evm.TU.supercontig_62.33;pid=evm.TU.supercontig_62.33;prot=eq;transcript=eq + supercontig_62 No
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