Gene family  

Sub-families
ORTHO003485 (29 genes in 19 species)
ORTHO005614 (25 genes in 19 species)
ORTHO007202 (23 genes in 18 species)
View all sub-families (11)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (8 genes)
ath
Arabidopsis thaliana (8 genes)
bdi
Brachypodium distachyon (7 genes)
cpa
Carica papaya (6 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (16 genes)
lja
Lotus japonicus (8 genes)
mdo
Malus domestica (17 genes)
mes
Manihot esculenta (9 genes)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (9 genes)
osaindica
Oryza sativa ssp. indica (11 genes)
ppa
Physcomitrella patens (11 genes)
ptr
Populus trichocarpa (15 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (6 genes)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (6 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (9 genes)



The gene family HOM000569 has 176 genes in 20 species (8 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 176 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G35750 aly name=fgenesh1_pm.C_scaffold_1002719;pid=313939;prot=eq;tid=313939 - scaffold_1 No
AL2G15300 aly name=fgenesh1_pg.C_scaffold_2001076;pid=338977;prot=eq;tid=338977 - scaffold_2 No
AL2G23540 aly name=fgenesh2_kg.2__1734__AT1G74680.1;pid=476604;prot=eq;tid=476604 + scaffold_2 No
AL3G03090 aly name=fgenesh2_kg.3__310__AT3G03650.1;pid=477609;prot=eq;tid=477609 - scaffold_3 No
AL4G20400 aly name=fgenesh2_kg.4__1534__AT2G35100.1;pid=482474;prot=eq;tid=482474 - scaffold_4 No
AL5G13480 aly name=fgenesh2_kg.5__922__AT3G45400.1;pid=484930;prot=eq;tid=484930 + scaffold_5 No
AL6G16750 aly name=scaffold_601734.1;pid=909677;prot=eq;tid=941190 + scaffold_6 No
AL8G04430 aly name=fgenesh2_kg.8__306__AT5G44930.2;pid=494490;prot=eq;tid=494490 + scaffold_8 No
AT1G34270 ath Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1266 Blast hits to 1263 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 4; Plants - 1015; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).;Exostosin family protein transcript=eq;prot=eq; - 1 No
AT1G67410 ath Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G74680.1); Has 1249 Blast hits to 1240 proteins in 88 species: Archae - 0; Bacteria - 6; Metazoa - 115; Fungi - 4; Plants - 1041; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).;Exostosin family protein transcript=eq;prot=eq; - 1 No
AT1G74680 ath Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1193 Blast hits to 1185 proteins in 64 species: Archae - 0; Bacteria - 4; Metazoa - 45; Fungi - 4; Plants - 1081; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).;Exostosin family protein transcript=eq;prot=eq; + 1 No
AT2G35100 ath Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems.;Exostosin family protein transcript=eq;prot=eq; - 2 No
AT3G03650 ath embryo sac development arrest 5 (EDA5); FUNCTIONS IN: catalytic activity; INVOLVED IN: megagametogenesis, pollen tube development; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G45400.1); Has 1124 Blast hits to 1120 proteins in 61 species: Archae - 0; Bacteria - 6; Metazoa - 39; Fungi - 0; Plants - 1020; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).;Exostosin family protein transcript=eq;prot=eq; - 3 No
AT3G45400 ath exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G03650.1); Has 1358 Blast hits to 1353 proteins in 108 species: Archae - 0; Bacteria - 4; Metazoa - 218; Fungi - 4; Plants - 1054; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).;exostosin family protein transcript=eq;prot=eq; + 3 No
AT5G16890 ath Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Exostosin family protein transcript=eq;prot=eq; + 5 No
AT5G44930 ath Encodes a putative arabinosyltransferase.;Exostosin family protein transcript=eq;prot=eq; - 5 No
BD1G24360 bdi Similar to arabinosyltransferase. CAZy family GT47 pid=Bradi1g24360.1;tid=Bradi1g24360.1;GeneName=Bradi1g24360;Name=BdARAD1;transcript=eq;prot=eq - Bd1 No
BD1G63740 bdi Similar to arabinosyltransferase. CAZy family GT47 pid=Bradi1g63740.1;tid=Bradi1g63740.1;GeneName=Bradi1g63740;Name=BdGT47B2;transcript=eq;prot=eq - Bd1 No
BD2G53000 bdi Similar to arabinosyltransferase. CAZy family GT47 pid=Bradi2g53000.1;tid=Bradi2g53000.1;GeneName=Bradi2g53000;Name=BdGT47B6;transcript=eq;prot=eq - Bd2 No
BD2G59047 bdi pid=Bradi2g59047.1;tid=Bradi2g59047.1;GeneName=Bradi2g59047;transcript=eq;prot=eq + Bd2 No
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