Gene family  

Sub-families
ORTHO002547 (32 genes in 24 species)
ORTHO003614 (29 genes in 20 species)
ORTHO009531 (20 genes in 13 species)
View all sub-families (15)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (8 genes)
ath
Arabidopsis thaliana (8 genes)
bdi
Brachypodium distachyon (8 genes)
cpa
Carica papaya (7 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (7 genes)
gma
Glycine max (21 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (14 genes)
mes
Manihot esculenta (11 genes)
mrcc299
Micromonas sp. RCC299 (3 genes)
mtr
Medicago truncatula (6 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (8 genes)
osaindica
Oryza sativa ssp. indica (9 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (15 genes)
rco
Ricinus communis (7 genes)
sbi
Sorghum bicolor (9 genes)
smo
Selaginella moellendorffii (4 genes)
tca
Theobroma cacao (7 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (10 genes)



The gene family HOM000533 has 187 genes in 25 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 10, showing 20 records out of 187 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G41100 aly name=fgenesh2_kg.1__3868__AT1G47740.1;pid=473914;prot=eq;tid=473914 + scaffold_1 No
AL2G29080 aly name=fgenesh2_kg.2__2308__AT1G80690.1;pid=477178;prot=eq;tid=477178 + scaffold_2 No
AL4G06220 aly name=fgenesh2_kg.4__437__AT2G25190.1;pid=481377;prot=eq;tid=481377 + scaffold_4 No
AL6G25240 aly name=scaffold_602618.1;pid=910561;prot=eq;tid=942074 + scaffold_6 No
AL7G16460 aly name=fgenesh2_kg.7__1691__AT4G25680.1;pid=492258;prot=eq;tid=492258 - scaffold_7 No
AL7G16480 aly name=scaffold_701749.1;pid=914007;prot=eq;tid=945520 - scaffold_7 No
AL7G25510 aly name=fgenesh2_kg.7__2561__AT4G17486.1;pid=493128;prot=eq;tid=493128 + scaffold_7 No
AL8G00620 aly name=fgenesh2_kg.8__66__AT5G47310.1;pid=494250;prot=eq;tid=494250 - scaffold_8 No
AT1G47740 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 836 Blast hits to 836 proteins in 174 species: Archae - 0; Bacteria - 2; Metazoa - 222; Fungi - 83; Plants - 351; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 1 No
AT1G80690 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; - 1 No
AT2G25190 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31980.1); Has 848 Blast hits to 846 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 77; Plants - 355; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 2 No
AT4G17486 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G47310.1); Has 845 Blast hits to 845 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 76; Plants - 355; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; - 4 No
AT4G25660 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25680.1); Has 753 Blast hits to 753 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 55; Plants - 348; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 4 No
AT4G25680 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25660.1); Has 754 Blast hits to 754 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 56; Plants - 348; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 4 No
AT5G25170 ath PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT2G25190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 5 No
AT5G47310 ath PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G17486.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein transcript=eq;prot=eq; + 5 No
BD1G37890 bdi pid=Bradi1g37890.1;tid=Bradi1g37890.1;GeneName=Bradi1g37890;transcript=eq;prot=eq + Bd1 No
BD1G47440 bdi pid=Bradi1g47440.1;tid=Bradi1g47440.1;GeneName=Bradi1g47440;transcript=eq;prot=eq + Bd1 No
BD1G52070 bdi pid=Bradi1g52070.1;tid=Bradi1g52070.1;GeneName=Bradi1g52070;transcript=eq;prot=eq + Bd1 No
BD1G71290 bdi pid=Bradi1g71290.2;tid=Bradi1g71290.2;GeneName=Bradi1g71290;transcript=eq;prot=eq - Bd1 No
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