Gene family 
- Id
- HOM000533
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO002547 (32 genes in 24 species)
ORTHO003614 (29 genes in 20 species)
ORTHO009531 (20 genes in 13 species)
View all sub-families (15)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (8 genes)
- ath
- Arabidopsis thaliana (8 genes)
- bdi
- Brachypodium distachyon (8 genes)
- cpa
- Carica papaya (7 genes)
- cre
- Chlamydomonas reinhardtii (2 genes)
- fve
- Fragaria vesca (7 genes)
- gma
- Glycine max (21 genes)
- lja
- Lotus japonicus (5 genes)
- mdo
- Malus domestica (14 genes)
- mes
- Manihot esculenta (11 genes)
- mrcc299
- Micromonas sp. RCC299 (3 genes)
- mtr
- Medicago truncatula (6 genes)
- olu
- Ostreococcus lucimarinus (2 genes)
- osa
- Oryza sativa ssp. japonica (8 genes)
- osaindica
- Oryza sativa ssp. indica (9 genes)
- ota
- Ostreococcus tauri (2 genes)
- ppa
- Physcomitrella patens (5 genes)
- ptr
- Populus trichocarpa (15 genes)
- rco
- Ricinus communis (7 genes)
- sbi
- Sorghum bicolor (9 genes)
- smo
- Selaginella moellendorffii (4 genes)
- tca
- Theobroma cacao (7 genes)
- vca
- Volvox carteri (2 genes)
- vvi
- Vitis vinifera (7 genes)
- zma
- Zea mays (10 genes)
The gene family HOM000533 has 187 genes in 25 species (3 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000533
Page 1 of 10, showing 20 records out of 187 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G41100 | aly | name=fgenesh2_kg.1__3868__AT1G47740.1;pid=473914;prot=eq;tid=473914 | + | scaffold_1 | No | |
| AL2G29080 | aly | name=fgenesh2_kg.2__2308__AT1G80690.1;pid=477178;prot=eq;tid=477178 | + | scaffold_2 | No | |
| AL4G06220 | aly | name=fgenesh2_kg.4__437__AT2G25190.1;pid=481377;prot=eq;tid=481377 | + | scaffold_4 | No | |
| AL6G25240 | aly | name=scaffold_602618.1;pid=910561;prot=eq;tid=942074 | + | scaffold_6 | No | |
| AL7G16460 | aly | name=fgenesh2_kg.7__1691__AT4G25680.1;pid=492258;prot=eq;tid=492258 | - | scaffold_7 | No | |
| AL7G16480 | aly | name=scaffold_701749.1;pid=914007;prot=eq;tid=945520 | - | scaffold_7 | No | |
| AL7G25510 | aly | name=fgenesh2_kg.7__2561__AT4G17486.1;pid=493128;prot=eq;tid=493128 | + | scaffold_7 | No | |
| AL8G00620 | aly | name=fgenesh2_kg.8__66__AT5G47310.1;pid=494250;prot=eq;tid=494250 | - | scaffold_8 | No | |
| AT1G47740 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 836 Blast hits to 836 proteins in 174 species: Archae - 0; Bacteria - 2; Metazoa - 222; Fungi - 83; Plants - 351; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G80690 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT2G25190 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31980.1); Has 848 Blast hits to 846 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 77; Plants - 355; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | + | 2 | No |
| AT4G17486 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G47310.1); Has 845 Blast hits to 845 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 76; Plants - 355; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | - | 4 | No |
| AT4G25660 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25680.1); Has 753 Blast hits to 753 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 55; Plants - 348; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | + | 4 | No |
| AT4G25680 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G25660.1); Has 754 Blast hits to 754 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 56; Plants - 348; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | + | 4 | No |
| AT5G25170 | ath | PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT2G25190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | + | 5 | No |
| AT5G47310 | ath | PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT4G17486.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein | transcript=eq;prot=eq; | + | 5 | No |
| BD1G37890 | bdi | pid=Bradi1g37890.1;tid=Bradi1g37890.1;GeneName=Bradi1g37890;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G47440 | bdi | pid=Bradi1g47440.1;tid=Bradi1g47440.1;GeneName=Bradi1g47440;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G52070 | bdi | pid=Bradi1g52070.1;tid=Bradi1g52070.1;GeneName=Bradi1g52070;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G71290 | bdi | pid=Bradi1g71290.2;tid=Bradi1g71290.2;GeneName=Bradi1g71290;transcript=eq;prot=eq | - | Bd1 | No |