Gene family  

Sub-families
ORTHO000348 (66 genes in 25 species)
ORTHO001729 (36 genes in 23 species)
ORTHO013290 (14 genes in 12 species)
View all sub-families (9)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (10 genes)
ath
Arabidopsis thaliana (9 genes)
bdi
Brachypodium distachyon (7 genes)
cpa
Carica papaya (7 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (13 genes)
lja
Lotus japonicus (14 genes)
mdo
Malus domestica (20 genes)
mes
Manihot esculenta (7 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (10 genes)
olu
Ostreococcus lucimarinus (5 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (10 genes)
ptr
Populus trichocarpa (12 genes)
rco
Ricinus communis (5 genes)
sbi
Sorghum bicolor (5 genes)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (7 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (11 genes)
zma
Zea mays (7 genes)



The gene family HOM000526 has 188 genes in 25 species (11 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 10, showing 20 records out of 188 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G08540 aly name=scaffold_44300001.1;pid=920671;prot=eq;tid=952184 - scaffold_443 No
AL4G08930 aly name=fgenesh1_pg.C_scaffold_4000667;pid=344325;prot=eq;tid=344325 - scaffold_4 No
AL5G12940 aly name=fgenesh1_pg.C_scaffold_5000974;pid=347582;prot=eq;tid=347582 + scaffold_5 No
AL6G13560 aly name=fgenesh2_kg.6__1342__AT5G13840.1;pid=488208;prot=eq;tid=488208 - scaffold_6 No
AL6G27240 aly name=fgenesh2_kg.6__2666__AT5G27945.1;pid=489532;prot=eq;tid=489532 - scaffold_6 No
AL6G28380 aly name=fgenesh2_kg.6__2753__AT5G27570.1;pid=489619;prot=eq;tid=489619 + scaffold_6 No
AL6G35050 aly name=scaffold_603626.1;pid=911569;prot=eq;tid=943082 - scaffold_6 No
AL7G05380 aly name=fgenesh1_pg.C_scaffold_7000451;pid=353278;prot=eq;tid=353278 + scaffold_7 No
AL7G07950 aly name=fgenesh2_kg.7__793__AT4G33270.1;pid=491360;prot=eq;tid=491360 + scaffold_7 No
AL7G19300 aly name=scaffold_702057.1;pid=914315;prot=eq;tid=945828 - scaffold_7 No
AT4G11920 ath Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication.;cell cycle switch protein 52 A2 transcript=eq;prot=eq; - 4 No
AT4G22910 ath FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink).;FIZZY-related 2 transcript=eq;prot=eq; + 4 No
AT4G33260 ath putative cdc20 protein (CDC20.2);Transducin family protein / WD-40 repeat family protein transcript=eq;prot=eq; - 4 No
AT4G33270 ath putative cdc20 protein (CDC20.1);Transducin family protein / WD-40 repeat family protein transcript=eq;prot=eq; - 4 No
AT5G13840 ath FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1); Has 48305 Blast hits to 24690 proteins in 714 species: Archae - 60; Bacteria - 7363; Metazoa - 18902; Fungi - 10741; Plants - 5341; Viruses - 0; Other Eukaryotes - 5898 (source: NCBI BLink).;FIZZY-related 3 transcript=eq;prot=eq; - 5 No
AT5G26900 ath Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G27080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Transducin family protein / WD-40 repeat family protein transcript=eq;prot=eq; + 5 No
AT5G27080 ath Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G26900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Transducin family protein / WD-40 repeat family protein transcript=eq;prot=eq; - 5 No
AT5G27570 ath Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G27080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; - 5 No
AT5G27945 ath Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G27570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein transcript=eq;prot=eq; + 5 No
BD1G76990 bdi protein kinase C binding, ubiquitin-protein ligase activity (Blast2GO) pid=Bradi1g76990.1;tid=Bradi1g76990.1;GeneName=Bradi1g76990;transcript=eq;prot=eq - Bd1 No
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