Gene family 
- Id
- HOM000493
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO002856 (31 genes in 17 species)
ORTHO003925 (28 genes in 19 species)
ORTHO011349 (17 genes in 17 species)
View all sub-families (19)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (2 genes)
- ath
- Arabidopsis thaliana (10 genes)
- bdi
- Brachypodium distachyon (21 genes)
- cpa
- Carica papaya (6 genes)
- fve
- Fragaria vesca (4 genes)
- gma
- Glycine max (19 genes)
- lja
- Lotus japonicus (7 genes)
- mdo
- Malus domestica (16 genes)
- mes
- Manihot esculenta (6 genes)
- mtr
- Medicago truncatula (5 genes)
- osa
- Oryza sativa ssp. japonica (14 genes)
- osaindica
- Oryza sativa ssp. indica (16 genes)
- ppa
- Physcomitrella patens (1 gene)
- ptr
- Populus trichocarpa (13 genes)
- rco
- Ricinus communis (7 genes)
- sbi
- Sorghum bicolor (17 genes)
- smo
- Selaginella moellendorffii (3 genes)
- tca
- Theobroma cacao (5 genes)
- vvi
- Vitis vinifera (5 genes)
- zma
- Zea mays (21 genes)
The gene family HOM000493 has 198 genes in 20 species (19 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000493
Page 1 of 10, showing 20 records out of 198 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL4G07070 | aly | name=scaffold_400728.1;pid=901227;prot=eq;tid=932740 | - | scaffold_4 | Yes | |
| AL5G08470 | aly | name=scaffold_500889.1;pid=905185;prot=eq;tid=936698 | + | scaffold_5 | No | |
| AT1G14590 | ath | Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G28695 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28710.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G28700 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28710.3); Has 309 Blast hits to 303 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT1G28710 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G28700.1); Has 346 Blast hits to 340 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 321; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT2G02061 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G14590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | + | 2 | No |
| AT2G25720 | ath | unknown protein; Has 38 Blast hits to 38 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | transcript=eq;prot=eq; | - | 2 | Yes |
| AT4G15970 | ath | Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19970.1); Has 239 Blast hits to 233 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 239; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | + | 4 | No |
| AT4G19970 | ath | CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | transcript=eq;prot=eq; | + | 4 | No |
| AT5G40900 | ath | Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G14590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | + | 5 | No |
| AT5G44820 | ath | Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Nucleotide-diphospho-sugar transferase family protein | transcript=eq;prot=eq; | - | 5 | No |
| BD1G01750 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g01750.1;tid=Bradi1g01750.1;GeneName=Bradi1g01750;Name=BdGT77E10;transcript=eq;prot=eq | + | Bd1 | No |
| BD1G01760 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g01760.1;tid=Bradi1g01760.1;GeneName=Bradi1g01760;Name=BdGT77E11;transcript=eq;prot=eq | + | Bd1 | No |
| BD1G09720 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g09720.1;tid=Bradi1g09720.1;GeneName=Bradi1g09720;Name=BdGT77E1;transcript=eq;prot=eq | - | Bd1 | No |
| BD1G49780 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g49780.1;tid=Bradi1g49780.1;GeneName=Bradi1g49780;Name=BdGT77E7;transcript=eq;prot=eq | - | Bd1 | No |
| BD1G52610 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g52610.1;tid=Bradi1g52610.1;GeneName=Bradi1g52610;Name=BdGT77E8;transcript=eq;prot=eq | - | Bd1 | No |
| BD1G76460 | bdi | Similar to glycosyltransferase. CAZy family GT77 | pid=Bradi1g76460.1;tid=Bradi1g76460.1;GeneName=Bradi1g76460;Name=BdGT77E17;transcript=eq;prot=eq | + | Bd1 | No |
| BD2G58987 | bdi | pid=Bradi2g58987.1;tid=Bradi2g58987.1;GeneName=Bradi2g58987;transcript=eq;prot=eq | + | Bd2 | No | |
| BD2G58994 | bdi | pid=Bradi2g58994.1;tid=Bradi2g58994.1;GeneName=Bradi2g58994;transcript=eq;prot=eq | + | Bd2 | No |