Gene family  

Sub-families
ORTHO001291 (40 genes in 19 species)
ORTHO004682 (27 genes in 17 species)
ORTHO006227 (24 genes in 17 species)
View all sub-families (16)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (9 genes)
ath
Arabidopsis thaliana (9 genes)
bdi
Brachypodium distachyon (11 genes)
cpa
Carica papaya (9 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (6 genes)
gma
Glycine max (18 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (9 genes)
mtr
Medicago truncatula (11 genes)
osa
Oryza sativa ssp. japonica (11 genes)
osaindica
Oryza sativa ssp. indica (12 genes)
ppa
Physcomitrella patens (6 genes)
ptr
Populus trichocarpa (12 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (12 genes)
smo
Selaginella moellendorffii (9 genes)
tca
Theobroma cacao (6 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (9 genes)
zma
Zea mays (15 genes)



The gene family HOM000492 has 198 genes in 22 species (9 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 10, showing 20 records out of 198 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G15520 aly name=fgenesh1_pm.C_scaffold_1001247;pid=312467;prot=eq;tid=312467 - scaffold_1 No
AL1G29050 aly name=fgenesh2_kg.1__2947__AT1G27920.1;pid=472993;prot=eq;tid=472993 + scaffold_1 No
AL4G25130 aly name=Al_scaffold_0004_2444;pid=870281;prot=eq;tid=901794 + scaffold_4 No
AL5G00990 aly name=fgenesh2_kg.5__101__AT2G01910.1;pid=484109;prot=eq;tid=484109 + scaffold_5 No
AL5G31550 aly name=Al_scaffold_0005_3017;pid=867538;prot=eq;tid=899051 - scaffold_5 No
AL7G15220 aly name=fgenesh2_kg.7__1559__AT4G26760.1;pid=492126;prot=eq;tid=492126 + scaffold_7 No
AL8G15820 aly name=fgenesh2_kg.8__1046__AT5G51600.1;pid=495230;prot=eq;tid=495230 - scaffold_8 No
AL8G20620 aly name=fgenesh2_kg.8__1424__AT5G55230.1;pid=495608;prot=eq;tid=495608 + scaffold_8 No
AL8G28560 aly name=fgenesh2_kg.8__2217__AT5G62250.1;pid=496401;prot=eq;tid=496401 + scaffold_8 No
AT1G14690 ath microtubule-associated protein 65-7 (MAP65-7); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: Microtubule associated protein (MAP65/ASE1) family protein (TAIR:AT2G01910.1); Has 3902 Blast hits to 3379 proteins in 390 species: Archae - 69; Bacteria - 268; Metazoa - 1928; Fungi - 367; Plants - 438; Viruses - 6; Other Eukaryotes - 826 (source: NCBI BLink).;microtubule-associated protein 65-7 transcript=eq;prot=eq; - 1 No
AT1G27920 ath microtubule-associated protein 65-8 (MAP65-8); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 2013 Blast hits to 1836 proteins in 335 species: Archae - 36; Bacteria - 203; Metazoa - 697; Fungi - 206; Plants - 352; Viruses - 0; Other Eukaryotes - 519 (source: NCBI BLink).;microtubule-associated protein 65-8 transcript=eq;prot=eq; + 1 No
AT2G01910 ath Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.;Microtubule associated protein (MAP65/ASE1) family protein transcript=eq;prot=eq; + 2 No
AT2G38720 ath microtubule-associated protein 65-5 (MAP65-5); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 9645 Blast hits to 7381 proteins in 767 species: Archae - 226; Bacteria - 1139; Metazoa - 4615; Fungi - 969; Plants - 706; Viruses - 30; Other Eukaryotes - 1960 (source: NCBI BLink).;microtubule-associated protein 65-5 transcript=eq;prot=eq; + 2 No
AT3G60840 ath microtubule-associated protein 65-4 (MAP65-4); INVOLVED IN: anaphase; LOCATED IN: nucleus, vacuole, preprophase band, phragmoplast, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: Microtubule associated protein (MAP65/ASE1) family protein (TAIR:AT5G51600.1); Has 9353 Blast hits to 7282 proteins in 721 species: Archae - 305; Bacteria - 1033; Metazoa - 4598; Fungi - 860; Plants - 701; Viruses - 22; Other Eukaryotes - 1834 (source: NCBI BLink).;microtubule-associated protein 65-4 transcript=eq;prot=eq; - 3 No
AT4G26760 ath microtubule-associated protein 65-2 (MAP65-2); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 65-1 (TAIR:AT5G55230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;microtubule-associated protein 65-2 transcript=eq;prot=eq; - 4 No
AT5G51600 ath Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.;Microtubule associated protein (MAP65/ASE1) family protein transcript=eq;prot=eq; - 5 No
AT5G55230 ath Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.;microtubule-associated proteins 65-1 transcript=eq;prot=eq; + 5 No
AT5G62250 ath microtubule-associated protein 65-9 (MAP65-9); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: Microtubule associated protein (MAP65/ASE1) family protein (TAIR:AT5G51600.1); Has 14792 Blast hits to 10558 proteins in 786 species: Archae - 349; Bacteria - 1217; Metazoa - 7703; Fungi - 921; Plants - 837; Viruses - 44; Other Eukaryotes - 3721 (source: NCBI BLink).;microtubule-associated protein 65-9 transcript=eq;prot=eq; + 5 No
BD1G10560 bdi pid=Bradi1g10560.1;tid=Bradi1g10560.1;GeneName=Bradi1g10560;transcript=eq;prot=eq + Bd1 No
BD1G36150 bdi motor activity, ATPase activity (Blast2GO) pid=Bradi1g36150.1;tid=Bradi1g36150.1;GeneName=Bradi1g36150;transcript=eq;prot=eq - Bd1 No
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