Gene family  

Sub-families
ORTHO000656 (50 genes in 21 species)
ORTHO001792 (35 genes in 17 species)
ORTHO013477 (13 genes in 8 species)
View all sub-families (7)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (8 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (10 genes)
cpa
Carica papaya (8 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (5 genes)
lja
Lotus japonicus (46 genes)
mdo
Malus domestica (10 genes)
mes
Manihot esculenta (5 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (7 genes)
osa
Oryza sativa ssp. japonica (17 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (9 genes)
rco
Ricinus communis (13 genes)
sbi
Sorghum bicolor (8 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (9 genes)
vvi
Vitis vinifera (6 genes)
zma
Zea mays (16 genes)



The gene family HOM000482 has 202 genes in 23 species (14 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 11, showing 20 records out of 202 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G01740 aly name=scaffold_900036.1;pid=921172;prot=eq;tid=952685 + scaffold_9 No
AL0G01750 aly name=fgenesh2_kg.9__106__ATCG01250.1;pid=497141;prot=eq;tid=497141 + scaffold_9 No
AL1G38240 aly name=scaffold_104084.1;pid=891290;prot=eq;tid=922803 + scaffold_1 No
AL1G38250 aly name=fgenesh2_kg.1__3689__ATCG00890.1;pid=473735;prot=eq;tid=473735 + scaffold_1 No
AL2G11040 aly name=scaffold_201136.1;pid=894062;prot=eq;tid=925575 - scaffold_2 No
AL2G11050 aly name=scaffold_201137.1;pid=894063;prot=eq;tid=925576 - scaffold_2 No
AL7G32270 aly name=fgenesh2_kg.7__3030__ATCG01250.1;pid=493597;prot=eq;tid=493597 - scaffold_7 No
AL7G32280 aly name=scaffold_703398.1;pid=915656;prot=eq;tid=947169 - scaffold_7 No
ATCG00890 ath NADH dehydrogenase ND2;NADH-Ubiquinone/plastoquinone (complex I) protein transcript=eq;prot=eq; - chloroplast No
ATCG00900 ath encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex;Ribosomal protein S7p/S5e family protein transcript=eq;prot=eq; - chloroplast No
ATCG01240 ath 30S chloroplast ribosomal protein S7;ribosomal protein S7 transcript=eq;prot=eq; + chloroplast No
ATCG01250 ath NADH dehydrogenase ND2;NADH-Ubiquinone/plastoquinone (complex I) protein transcript=eq;prot=eq; + chloroplast No
ATMG00285 ath encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.;NADH dehydrogenase 2A transcript=eq;warning : contains ambiguous nucleotide without single amino acide translation ->y 3; - mitochondrial No
BD1G05710 bdi pid=Bradi1g05710.1;tid=Bradi1g05710.1;GeneName=Bradi1g05710;transcript=eq;prot=eq + Bd1 No
BD3G27290 bdi pid=Bradi3g27290.1;tid=Bradi3g27290.1;GeneName=Bradi3g27290;transcript=eq;prot=eq - Bd3 No
BD4G17010 bdi pid=Bradi4g17010.1;tid=Bradi4g17010.1;GeneName=Bradi4g17010;transcript=eq;prot=eq + Bd4 No
BD4G17870 bdi pid=Bradi4g17870.1;tid=Bradi4g17870.1;GeneName=Bradi4g17870;transcript=eq;prot=eq + Bd4 No
BD4G23940 bdi pid=Bradi4g23940.1;tid=Bradi4g23940.1;GeneName=Bradi4g23940;transcript=eq;prot=eq - Bd4 No
BD4G37052 bdi pid=Bradi4g37052.1;tid=Bradi4g37052.1;GeneName=Bradi4g37052;transcript=eq;prot=eq - Bd4 No
BDCG00860 bdi ndhB;NADH dehydrogenase subunit 2;protein_id=ACF08681.1; RNA edited conceptual translation not provided;transl_table=11; - chloroplast No
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