Gene family  

Sub-families
ORTHO005960 (25 genes in 18 species)
ORTHO007164 (23 genes in 19 species)
ORTHO009522 (20 genes in 17 species)
View all sub-families (26)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (9 genes)
ath
Arabidopsis thaliana (9 genes)
bdi
Brachypodium distachyon (13 genes)
cpa
Carica papaya (4 genes)
fve
Fragaria vesca (8 genes)
gma
Glycine max (14 genes)
lja
Lotus japonicus (10 genes)
mdo
Malus domestica (20 genes)
mes
Manihot esculenta (12 genes)
mtr
Medicago truncatula (8 genes)
osa
Oryza sativa ssp. japonica (10 genes)
osaindica
Oryza sativa ssp. indica (12 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (17 genes)
rco
Ricinus communis (8 genes)
sbi
Sorghum bicolor (12 genes)
smo
Selaginella moellendorffii (5 genes)
tca
Theobroma cacao (9 genes)
vvi
Vitis vinifera (17 genes)
zma
Zea mays (13 genes)



The gene family HOM000450 has 214 genes in 20 species (5 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 11, showing 20 records out of 214 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G18340 aly name=fgenesh2_kg.1__1902__AT1G17430.1;pid=471948;prot=eq;tid=471948 + scaffold_1 No
AL2G21410 aly name=Al_scaffold_0002_1952;pid=877358;prot=eq;tid=908871 + scaffold_2 No
AL2G27230 aly name=fgenesh1_pg.C_scaffold_2002077;pid=339978;prot=eq;tid=339978 - scaffold_2 No
AL3G39420 aly name=fgenesh2_kg.3__3445__AT2G18360.1;pid=480744;prot=eq;tid=480744 - scaffold_3 No
AL6G09070 aly name=Al_scaffold_0006_847;pid=861338;prot=eq;tid=892851 + scaffold_6 No
AL6G21550 aly name=Al_scaffold_0006_2059;pid=862550;prot=eq;tid=894063 - scaffold_6 No
AL7G02220 aly name=scaffold_700229.1;pid=912487;prot=eq;tid=944000 + scaffold_7 No
AL7G04210 aly name=Al_scaffold_0007_389;pid=856890;prot=eq;tid=888403 + scaffold_7 No
AL7G08020 aly name=fgenesh2_kg.7__800__AT4G33180.1;pid=491367;prot=eq;tid=491367 - scaffold_7 No
AT1G17430 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G72620.1); Has 4935 Blast hits to 4934 proteins in 1109 species: Archae - 58; Bacteria - 3571; Metazoa - 147; Fungi - 8; Plants - 323; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
AT1G72620 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G17430.1); Has 6611 Blast hits to 6609 proteins in 1295 species: Archae - 83; Bacteria - 4976; Metazoa - 140; Fungi - 18; Plants - 334; Viruses - 0; Other Eukaryotes - 1060 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
AT1G78210 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 8308 Blast hits to 8306 proteins in 1517 species: Archae - 98; Bacteria - 5942; Metazoa - 236; Fungi - 70; Plants - 380; Viruses - 0; Other Eukaryotes - 1582 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 1 No
AT2G18360 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36610.1); Has 8797 Blast hits to 8792 proteins in 1517 species: Archae - 89; Bacteria - 6094; Metazoa - 449; Fungi - 67; Plants - 445; Viruses - 0; Other Eukaryotes - 1653 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 2 No
AT4G33180 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G21950.1); Has 8643 Blast hits to 8637 proteins in 1357 species: Archae - 85; Bacteria - 5901; Metazoa - 344; Fungi - 96; Plants - 652; Viruses - 2; Other Eukaryotes - 1563 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 4 No
AT4G36610 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18360.1); Has 7159 Blast hits to 7154 proteins in 1280 species: Archae - 79; Bacteria - 4806; Metazoa - 419; Fungi - 48; Plants - 467; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 4 No
AT4G39955 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 4 No
AT5G09430 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 5 No
AT5G21950 ath alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G33180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 5 No
BD1G21350 bdi pid=Bradi1g21350.1;tid=Bradi1g21350.1;GeneName=Bradi1g21350;transcript=eq;prot=eq - Bd1 No
BD1G21640 bdi pid=Bradi1g21640.1;tid=Bradi1g21640.1;GeneName=Bradi1g21640;transcript=eq;prot=eq + Bd1 No
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