Gene family  

Sub-families
ORTHO000066 (141 genes in 20 species)
ORTHO021078 (5 genes in 2 species)
ORTHO035742 (3 genes in 1 species)
View all sub-families (13)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (18 genes)
ath
Arabidopsis thaliana (15 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (8 genes)
fve
Fragaria vesca (8 genes)
gma
Glycine max (13 genes)
lja
Lotus japonicus (13 genes)
mdo
Malus domestica (50 genes)
mes
Manihot esculenta (10 genes)
mtr
Medicago truncatula (5 genes)
osa
Oryza sativa ssp. japonica (5 genes)
osaindica
Oryza sativa ssp. indica (6 genes)
ppa
Physcomitrella patens (7 genes)
ptr
Populus trichocarpa (14 genes)
rco
Ricinus communis (8 genes)
sbi
Sorghum bicolor (8 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (7 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (8 genes)



The gene family HOM000443 has 217 genes in 20 species (5 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 11, showing 20 records out of 217 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G10180 aly name=fgenesh1_pm.C_scaffold_710000001;pid=333388;prot=eq;tid=333388 - scaffold_710 No
AL1G21560 aly name=scaffold_102287.1;pid=889493;prot=eq;tid=921006 + scaffold_1 Yes
AL1G45570 aly name=scaffold_104844.1;pid=892050;prot=eq;tid=923563 + scaffold_1 No
AL2G01630 aly name=scaffold_200167.1;pid=893093;prot=eq;tid=924606 - scaffold_2 No
AL2G09490 aly name=scaffold_200964.1;pid=893890;prot=eq;tid=925403 - scaffold_2 No
AL2G17100 aly name=fgenesh1_pg.C_scaffold_2001228;pid=339129;prot=eq;tid=339129 + scaffold_2 No
AL3G09400 aly name=fgenesh1_pm.C_scaffold_3000742;pid=317726;prot=eq;tid=317726 - scaffold_3 No
AL3G37810 aly name=fgenesh1_pg.C_scaffold_3003089;pid=343326;prot=eq;tid=343326 - scaffold_3 No
AL3G37890 aly name=fgenesh2_kg.3__3300__AT2G17170.1;pid=480599;prot=eq;tid=480599 + scaffold_3 No
AL5G24070 aly name=fgenesh2_kg.5__1791__AT3G54030.1;pid=485799;prot=eq;tid=485799 + scaffold_5 No
AL6G01100 aly name=fgenesh2_kg.6__107__AT5G01060.1;pid=486973;prot=eq;tid=486973 - scaffold_6 No
AL6G28520 aly name=scaffold_602963.1;pid=910906;prot=eq;tid=942419 + scaffold_6 No
AL6G40930 aly name=fgenesh2_kg.6__3633__AT4G00710.1;pid=490499;prot=eq;tid=490499 - scaffold_6 No
AL7G05690 aly name=fgenesh1_pm.C_scaffold_7000451;pid=328224;prot=eq;tid=328224 + scaffold_7 No
AL7G24880 aly name=scaffold_702640.1;pid=914898;prot=eq;tid=946411 + scaffold_7 No
AL7G36440 aly name=fgenesh2_kg.7__3285__AT5G41260.1;pid=493852;prot=eq;tid=493852 - scaffold_7 No
AL8G01590 aly name=fgenesh2_kg.8__137__AT5G46570.1;pid=494321;prot=eq;tid=494321 - scaffold_8 No
AL8G25090 aly name=fgenesh2_kg.8__1845__AT5G59010.1;pid=496029;prot=eq;tid=496029 - scaffold_8 No
AT1G01740 ath Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 3 (TAIR:AT4G00710.1); Has 33834 Blast hits to 33303 proteins in 1392 species: Archae - 10; Bacteria - 2383; Metazoa - 7709; Fungi - 204; Plants - 21978; Viruses - 102; Other Eukaryotes - 1448 (source: NCBI BLink).;Protein kinase protein with tetratricopeptide repeat domain transcript=eq;prot=eq; - 1 No
AT1G50990 ath Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 1 (TAIR:AT4G35230.1); Has 36616 Blast hits to 36181 proteins in 1497 species: Archae - 12; Bacteria - 2984; Metazoa - 8327; Fungi - 618; Plants - 22250; Viruses - 102; Other Eukaryotes - 2323 (source: NCBI BLink).;Protein kinase protein with tetratricopeptide repeat domain transcript=eq;prot=eq; + 1 No
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